DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hoxa7 and ftz

DIOPT Version :9

Sequence 1:NP_034585.1 Gene:Hoxa7 / 15404 MGIID:96179 Length:229 Species:Mus musculus
Sequence 2:NP_477498.1 Gene:ftz / 40834 FlyBaseID:FBgn0001077 Length:410 Species:Drosophila melanogaster


Alignment Length:332 Identity:97/332 - (29%)
Similarity:123/332 - (37%) Gaps:127/332 - (38%)


- Green bases have known domain annotations that are detailed below.


Mouse     4 SYYVNALFSKYTAGASLFQNAEP-----TSCSFAPN---------------------SQRSGYGP 42
            :||.|:..:.|....|.:|...|     .||.:..|                     ::|.....
  Fly    30 TYYDNSGSNAYYQNTSNYQGYYPQESYSESCYYYNNQEQVTTQTVPPVQPTTPPPKATKRKAEDD 94

Mouse    43 GAGAFA------STVPGLYNVNSPLYQSPFASGY------------GLGADAYNLPCASYDQNIP 89
            .|...|      ||:..|  :.:|:.:..:...|            .:.......|..||||...
  Fly    95 AASIIAAVEERPSTLRAL--LTNPVKKLKYTPDYFYTTVEQVKKAPAVSTKVTASPAPSYDQEYV 157

Mouse    90 GLCSDLAKGACDKAD------------------------------EGVLHGP------------A 112
            .:.:..|....|..|                              ||:...|            .
  Fly   158 TVPTPSASEDVDYLDVYSPQSQTQKLKNGDFATPPPTTPTSLPPLEGISTPPQSPGEKSSSAVSQ 222

Mouse   113 EASFRI---------YPW------MRSSGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEI 162
            |.:.||         :.|      :.|...|.||.|||||||||||||||||||||:||||||:|
  Fly   223 EINHRIVTAPNGAGDFNWSHIEETLASDCKDSKRTRQTYTRYQTLELEKEFHFNRYITRRRRIDI 287

Mouse   163 AHALCLTERQIKIWFQNRRMKWKK--------EH------------KDESQAPTAAPEDAVPSV- 206
            |:||.|:||||||||||||||.||        ||            :..|.|.|.||...||.. 
  Fly   288 ANALSLSERQIKIWFQNRRMKSKKDRTLDSSPEHCGAGYTAMLPPLEATSTATTGAPSVPVPMYH 352

Mouse   207 ---STAA 210
               :|||
  Fly   353 HHQTTAA 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hoxa7NP_034585.1 Antp-type hexapeptide 118..123 2/19 (11%)
Homeobox 133..185 CDD:278475 46/51 (90%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 186..229 13/49 (27%)
ftzNP_477498.1 FTZ 1..248 CDD:281812 33/219 (15%)
Homeobox 257..310 CDD:278475 46/52 (88%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45659
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.910

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