DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hoxa7 and Dbx

DIOPT Version :10

Sequence 1:NP_001406200.1 Gene:Hoxa7 / 15404 MGIID:96179 Length:270 Species:Mus musculus
Sequence 2:NP_647677.2 Gene:Dbx / 38254 FlyBaseID:FBgn0261723 Length:741 Species:Drosophila melanogaster


Alignment Length:199 Identity:59/199 - (29%)
Similarity:80/199 - (40%) Gaps:54/199 - (27%)


- Green bases have known domain annotations that are detailed below.


Mouse    52 PTPTTCPAPPTTKTSPGSAVTSPKAPATRRTRACFTARPKPVSASTPGCAVQSFFLSPSFLSSIS 116
            |||...|.||.                        .|:|.| |..||       || |..|:.  
  Fly   362 PTPPPPPPPPV------------------------IAKPMP-SRPTP-------FL-PHTLNH-- 391

Mouse   117 FLTPALSPLLPFFRPGFLS-QRQGELRPPGSLTHHCTRGHFQNGAEANGTEGPDRKRG---RQTY 177
               |.|..||...|..::| ..|....|||           |....|:.|.|..| ||   |..:
  Fly   392 ---PHLHSLLAHCRNPYMSVGAQVFPLPPG-----------QGFPWAHSTRGKPR-RGMMRRAVF 441

Mouse   178 TRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKDESQAPTAAPED 242
            :..|...|||.|...:|:::..|.::|..|.|.:.|:|||||||||||:...:.|..|...:.:.
  Fly   442 SDSQRKGLEKRFQQQKYISKPDRKKLAERLGLKDSQVKIWFQNRRMKWRNSKERELLASGGSRDQ 506

Mouse   243 AVPS 246
            .:|:
  Fly   507 TLPN 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hoxa7NP_001406200.1 Homeodomain 171..227 CDD:459649 25/58 (43%)
DbxNP_647677.2 Homeodomain 437..491 CDD:459649 23/53 (43%)

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