Protein Alignment Hoxa7 and scro

DIOPT Version :10

• Sequence 1: NP_001406200.1
• Gene: Hoxa7 / 15404
• MGIID: 96179
• Length: 270
• Species: Mus musculus
• Sequence 2: NP_001015473.1
• Gene: scro / 3355151
• FlyBaseID: FBgn0287186
• Length: 468
• Species: Drosophila melanogaster
• Alignment Length: 217
• Identity: 56/217 - (25%)
• Similarity: 89/217 - (41%)
• Gaps: 42/217 - (19%)

Mouse    52 PTPTTCPAPPTTKTSPGSAVTSPKAPATRRTRACFTARPKPVSAST----PGCAVQSFFLSPSFL 112
            |:|....:..::..|||:..||..|              .|.:..|    ||  ||::......|
  Fly   139 PSPFRSNSSSSSINSPGTLTTSTMA--------------NPYAMGTLYHSPG--VQTYCGPTDNL 187

Mouse   113 SSISFLTPALSPLLPFFR----PGFLSQRQGELRPPGSLTHHCTRGHFQNGAEANGTEG------ 167
            |.....|...:....:..    |.|...|.......|:::|   .|:....|..:.::.
  Fly   188 SLAGHYTDMRNSASWYGSTANDPRFAISRLMSSSASGTMSH---MGNMSGLAACSVSDSKPLQFP 249

Mouse   168 -PDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKD 231
             ..|::.|..:|:.|..|||:.|...|||:...|..:|..:.||..|:||||||.|.|.|::.|:
  Fly   250 LAQRRKRRVLFTQAQVYELERRFKQQRYLSAPEREHLASLIHLTPTQVKIWFQNHRYKCKRQAKE 314

Mouse   232 ESQA-------PTAAPED-AVP 245
            ::.|       |.::|.. |||
  Fly   315 KAMAEQNQHNQPASSPRRVAVP 336

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hoxa7	NP_001406200.1	Homeodomain	171..227	CDD:459649	23/55 (42%)
scro	NP_001015473.1	Homeodomain	254..310	CDD:459649	23/55 (42%)