DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hoxa7 and ind

DIOPT Version :9

Sequence 1:NP_034585.1 Gene:Hoxa7 / 15404 MGIID:96179 Length:229 Species:Mus musculus
Sequence 2:NP_996087.2 Gene:ind / 2768974 FlyBaseID:FBgn0025776 Length:320 Species:Drosophila melanogaster


Alignment Length:245 Identity:75/245 - (30%)
Similarity:108/245 - (44%) Gaps:55/245 - (22%)


- Green bases have known domain annotations that are detailed below.


Mouse     3 SSYYVNA-LFS--KYTAGASLFQNAEPT-SCSFAPNSQRSGYGPGAGAFASTVPGLYNVNSPLYQ 63
            |.|:..| ||:  :.::|.|.::...|: ..|..||||:             :|.::|    ||.
  Fly   104 SLYHPYAQLFASKRKSSGFSNYEGCYPSPPLSANPNSQQ-------------LPPIHN----LYG 151

Mouse    64 SPFASGYGL--------GADAYNLPCASYDQNIPGLCSDLAKG-------ACDKADEGVLH---- 109
            ||...|..|        ...|.:.....|..|.     |..:|       :|......:.:    
  Fly   152 SPVVGGLPLPEPGSFCTSPSASSSASLDYTNNF-----DEPQGKRFKHESSCSPNSSPLKNHSSG 211

Mouse   110 GPAEASFRIYPWMRSSGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIK 174
            ||.|    |.|.:.......||.|..:|..|.||||:||..|.||:|.||||||:.|.|:|:|:|
  Fly   212 GPVE----ITPLINDYADSSKRIRTAFTSTQLLELEREFSHNAYLSRLRRIEIANRLRLSEKQVK 272

Mouse   175 IWFQNRRMKWKKEHKDESQAPT---AAPEDAVPSVSTAADKADEEEEEEE 221
            |||||||:|.|   |..|::||   :...:..|..|..:.:....|.:.|
  Fly   273 IWFQNRRVKQK---KGGSESPTFNLSTNSNGSPQASPVSPQVKVHELKVE 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hoxa7NP_034585.1 Antp-type hexapeptide 118..123 2/4 (50%)
Homeobox 133..185 CDD:278475 32/51 (63%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 186..229 8/39 (21%)
indNP_996087.2 Homeobox 231..283 CDD:278475 32/51 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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