Protein Alignment Hoxa5 and abd-A

DIOPT Version :10

• Sequence 1: NP_034583.1
• Gene: Hoxa5 / 15402
• MGIID: 96177
• Length: 270
• Species: Mus musculus
• Sequence 2: NP_732176.1
• Gene: abd-A / 42037
• FlyBaseID: FBgn0000014
• Length: 590
• Species: Drosophila melanogaster
• Alignment Length: 279
• Identity: 101/279 - (36%)
• Similarity: 127/279 - (45%)
• Gaps: 71/279 - (25%)

Mouse    25 GDHS-SVSEQFRDSASMHSGRYGYGYNGMDLSVGRSGSGHFGSGERARSYAAGASAAPAEPRYSQ 88
            ||.| |.|.....|:|:|...       .|.|.|.:.:.  .|...|.|.||.|:||.|
  Fly   199 GDSSCSPSPSASGSSSLHRSL-------NDNSPGSASAS--ASASAASSVAAAAAAAAA------ 248

Mouse    89 PATSTHSPPPDPLPCSAVAPSPGS-DSHHGGKNSLGNSSG-----------------------AS 129
            .|:|:.:     :|.|.:.|...: .|.|||.:.:...:|                       ||
  Fly   249 AASSSFA-----IPTSKMYPYVSNHPSSHGGLSGMAGFTGLEDKSCSRYTDTVMNSYQSMSVPAS 308

Mouse   130 ANA-------GSTHISSREGVGTASAAEEDA-------PASSEQAGAQSEPSPAPPAQPQIYPWM 180
            |:|       .:|..:|.....:|.|...|:       |||....||...........|: ||||
  Fly   309 ASAQFAQFYQHATAAASAVSAASAGAIGVDSLGNACTQPASGVMPGAGGAGGAGIADLPR-YPWM 372

Mouse   181 RKL--------HISHDNIGGPEG---KRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 234
            ...        .:...:..||.|   :|.|..|||:||||||||||||.||||||||||||||||
  Fly   373 TLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCL 437

Mouse   235 SERQIKIWFQNRRMKWKKD 253
            :||||||||||||||.||:
  Fly   438 TERQIKIWFQNRRMKLKKE 456

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hoxa5	NP_034583.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	75..175		29/137 (21%)
		Antp-type hexapeptide	176..181		3/4 (75%)
		Homeodomain	196..252	CDD:459649	47/55 (85%)
abd-A	NP_732176.1	Homeodomain	399..455	CDD:459649	47/55 (85%)
		Abdominal-A	456..478	CDD:403567	0/1 (0%)