DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hoxa5 and ftz

DIOPT Version :9

Sequence 1:NP_034583.1 Gene:Hoxa5 / 15402 MGIID:96177 Length:270 Species:Mus musculus
Sequence 2:NP_477498.1 Gene:ftz / 40834 FlyBaseID:FBgn0001077 Length:410 Species:Drosophila melanogaster


Alignment Length:321 Identity:92/321 - (28%)
Similarity:120/321 - (37%) Gaps:98/321 - (30%)


- Green bases have known domain annotations that are detailed below.


Mouse     3 SYFVNSFCGR-YPNGPDYQLHNYGDHSSVSEQFRDSASMHSGRYGYGYNGMDLSVGRSGSGHFGS 66
            :|:.||.... |.|..:||  .|....|.||..            |.||..:             
  Fly    30 TYYDNSGSNAYYQNTSNYQ--GYYPQESYSESC------------YYYNNQE------------- 67

Mouse    67 GERARSYAAGASAAPAEPRYSQPATSTHSPPPD-----------PLPCSAVAPSPGSDSHHGG-- 118
                  .....:..|.:|....|..:......|           |....|:..:|.....:..  
  Fly    68 ------QVTTQTVPPVQPTTPPPKATKRKAEDDAASIIAAVEERPSTLRALLTNPVKKLKYTPDY 126

Mouse   119 --------KNSLGNSSGASANAGSTHISSREGVGTASAAEE------DAPASSEQAGAQSEPSPA 169
                    |.:...|:..:|:...::......|.|.||:|:      .:|.|..|.....:.:..
  Fly   127 FYTTVEQVKKAPAVSTKVTASPAPSYDQEYVTVPTPSASEDVDYLDVYSPQSQTQKLKNGDFATP 191

Mouse   170 PPAQPQIYPWMRKL-----------------HISHDNIGGPEG--------------------KR 197
            ||..|...|.:..:                 .|:|..:..|.|                    ||
  Fly   192 PPTTPTSLPPLEGISTPPQSPGEKSSSAVSQEINHRIVTAPNGAGDFNWSHIEETLASDCKDSKR 256

Mouse   198 ARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKS 258
            .|..||||||||||||||||||:||||||:||:||.||||||||||||||||.|||..|.|
  Fly   257 TRQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKKDRTLDS 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hoxa5NP_034583.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 75..175 20/126 (16%)
Antp-type hexapeptide 176..181 1/4 (25%)
Homeobox 199..252 CDD:333795 45/52 (87%)
ftzNP_477498.1 FTZ 1..248 CDD:281812 40/250 (16%)
Homeobox 257..310 CDD:278475 45/52 (87%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45659
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.910

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