DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hoxa5 and zen

DIOPT Version :10

Sequence 1:NP_034583.1 Gene:Hoxa5 / 15402 MGIID:96177 Length:270 Species:Mus musculus
Sequence 2:NP_476793.1 Gene:zen / 40828 FlyBaseID:FBgn0004053 Length:353 Species:Drosophila melanogaster


Alignment Length:177 Identity:62/177 - (35%)
Similarity:80/177 - (45%) Gaps:48/177 - (27%)


- Green bases have known domain annotations that are detailed below.


Mouse    78 SAAPAEPRYSQPATS-THSPPPDPLPCSAVAPSPGSDSHHGGKNSLGNSSGASANAGSTHISSRE 141
            ||.|:|.:||..... .|...|..||       |..:..:....:| |...:..:....|:||.|
  Fly    19 SADPSEVKYSDLIYGHHHDVNPIGLP-------PNYNQMNSNPTTL-NDHCSPQHVHQQHVSSDE 75

Mouse   142 GVGTASAAEEDAPASSEQAGAQSEPSPAPPAQPQIYPWMRKLHISHDNIGGPEGKRARTAYTRYQ 206
            .:                           |:||           :||: ...:.||:|||:|..|
  Fly    76 NL---------------------------PSQP-----------NHDS-QRVKLKRSRTAFTSVQ 101

Mouse   207 TLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 253
            .:|||.||..|.||.|.||||||..|.|.|||:||||||||||:|||
  Fly   102 LVELENEFKSNMYLYRTRRIEIAQRLSLCERQVKIWFQNRRMKFKKD 148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hoxa5NP_034583.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 75..175 19/97 (20%)
Antp-type hexapeptide 176..181 0/4 (0%)
Homeodomain 196..252 CDD:459649 37/55 (67%)
zenNP_476793.1 Homeodomain 91..147 CDD:459649 37/55 (67%)

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