Protein Alignment Hoxa5 and pb

DIOPT Version :10

• Sequence 1: NP_034583.1
• Gene: Hoxa5 / 15402
• MGIID: 96177
• Length: 270
• Species: Mus musculus
• Sequence 2: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Alignment Length: 254
• Identity: 81/254 - (31%)
• Similarity: 107/254 - (42%)
• Gaps: 80/254 - (31%)

Mouse    48 GYNGMDLSVGRSGSGHFG----------------SGERARSYAAGASAAPAEPRYSQPATS---T 93
            |..|:.:|||:.|.|..|                ..:|:...|...:|:......|||:.:   .
  Fly    48 GVGGVGVSVGQPGIGQQGVPPVPSVLMVNKMTPNCDKRSADTAYWMTASEGGFINSQPSMAEFLN 112

Mouse    94 HSPPPDPLPCSAVAPSPGSDSHHGGKNSLGNSSGASANAG---STHISSREGVGTASAAEEDAPA 155
            |..|..|                    .:|...|:.|..|   :.:::...|||.........|
  Fly   113 HLSPESP--------------------KIGTPVGSGAIGGVGVNVNVNVGVGVGYPVGVVPQTP- 156

Mouse   156 SSEQAGAQSEPSPAPPAQPQIYPWMRKLHIS-----HDNIGG-------PEG---KRARTAYTRY 205
                .|..|.|.         ||||::...|     ::|.|.       ||.   :|.|||||..
  Fly   157 ----DGMDSVPE---------YPWMKEKKTSRKSSNNNNQGDNSITEFVPENGLPRRLRTAYTNT 208

Mouse   206 QTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKK---------DNK 255
            |.||||||||||:||.|.||||||.:|.|:|||:|:||||||||.|:         |||
  Fly   209 QLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKTDDEDNK 267

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hoxa5	NP_034583.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	75..175		18/105 (17%)
		Antp-type hexapeptide	176..181		3/4 (75%)
		Homeodomain	196..252	CDD:459649	40/55 (73%)
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	40/55 (73%)