Protein Alignment Hoxa5 and scro

DIOPT Version :10

• Sequence 1: NP_034583.1
• Gene: Hoxa5 / 15402
• MGIID: 96177
• Length: 270
• Species: Mus musculus
• Sequence 2: NP_001015473.1
• Gene: scro / 3355151
• FlyBaseID: FBgn0287186
• Length: 468
• Species: Drosophila melanogaster
• Alignment Length: 225
• Identity: 56/225 - (24%)
• Similarity: 85/225 - (37%)
• Gaps: 55/225 - (24%)

Mouse    50 NGMDLSVGRSGS--------GHFGSGERARSYAAGASAAPAEPRYSQPATSTHSPPPDPLPCSA- 105
            ||...|..||.|        |...:...|..||.|.       .|..|...|:..|.|.|..:.
  Fly   135 NGNPPSPFRSNSSSSSINSPGTLTTSTMANPYAMGT-------LYHSPGVQTYCGPTDNLSLAGH 192

Mouse   106 VAPSPGSDSHHGG-----KNSLGNSSGASANAGSTHISSREGVGTASAAEEDAPASSEQAGAQSE 165
            ......|.|.:|.     :.::.....:||:...:|:.:..|:...|.::             |:
  Fly   193 YTDMRNSASWYGSTANDPRFAISRLMSSSASGTMSHMGNMSGLAACSVSD-------------SK 244

Mouse   166 PSPAPPAQPQIYPWMRKLHISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAH 230
            |...|.||                     .::.|..:|:.|..|||:.|...|||:...|..:|.
  Fly   245 PLQFPLAQ---------------------RRKRRVLFTQAQVYELERRFKQQRYLSAPEREHLAS 288

Mouse   231 ALCLSERQIKIWFQNRRMKWKKDNKLKSMS 260
            .:.|:..|:||||||.|.|.|:..|.|:|:
  Fly   289 LIHLTPTQVKIWFQNHRYKCKRQAKEKAMA 318

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hoxa5	NP_034583.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	75..175		20/105 (19%)
		Antp-type hexapeptide	176..181		0/4 (0%)
		Homeodomain	196..252	CDD:459649	22/55 (40%)
scro	NP_001015473.1	Homeodomain	254..310	CDD:459649	22/55 (40%)