Protein Alignment Hoxa4 and Ubx

DIOPT Version :9

• Sequence 1: NP_032291.1
• Gene: Hoxa4 / 15401
• MGIID: 96176
• Length: 285
• Species: Mus musculus
• Sequence 2: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Alignment Length: 289
• Identity: 91/289 - (31%)
• Similarity: 110/289 - (38%)
• Gaps: 65/289 - (22%)

Mouse    27 GGPGGGDGAVG-GGPGYPRPQSAPHLPAPNPHAARQPPAYYAPRAREPSYPGGLYPAPAAACPYA 90
            ||.|||.||.| ||.|.....:|.:....|..|...|   ..|.|..|....|.|...:...|.:
  Fly   116 GGGGGGGGAGGTGGAGNANGGNAANANGQNNPAGGMP---VRPSACTPDSRVGGYLDTSGGSPVS 177

Mouse    91 CRGASPARPEQSPAPGAHPSPAPQPPAPPRHCAPGPTTPAVATGGSAPACPLLLADQGPAGP--- 152
            .||.| |....|.:.|              :...|.....|...|:..|........|.|..
  Fly   178 HRGGS-AGGNVSVSGG--------------NGNAGGVQSGVGVAGAGTAWNANCTISGAAAQTAA 227

Mouse   153 -----KGKEPVVYPWM----------KKIHVSAVNSSYNG------------------------- 177
                 :......||||          .|..:.:..:.|.|
  Fly   228 ASSLHQASNHTFYPWMAIAGECPEDPTKSKIRSDLTQYGGISTDMGKRYSESLAGSLLPDWLGTN 292

Mouse   178 GEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKD---H 239
            |..:|.|..|||.|.||||||||.|.|||||||||:||.|||:|||:||||||||||.||:   .
  Fly   293 GLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKEIQAI 357

Mouse   240 KLPNTKMRSSNTASAPAGPPGKAQTHSPH 268
            |..|.:.:.:....|.|.....|.....|
  Fly   358 KELNEQEKQAQAQKAAAAAAAAAAVQGGH 386

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hoxa4	NP_032291.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	19..70		16/43 (37%)
		Antp-type hexapeptide	159..164		4/14 (29%)
		Homeobox	183..236	CDD:278475	41/52 (79%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	238..285		6/34 (18%)
Ubx	NP_536752.1	Homeobox	299..352	CDD:395001	41/52 (79%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	5	4.810