Protein Alignment Hoxa4 and Ubx

DIOPT Version :10

• Sequence 1: NP_032291.1
• Gene: Hoxa4 / 15401
• MGIID: 96176
• Length: 285
• Species: Mus musculus
• Sequence 2: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Alignment Length: 289
• Identity: 91/289 - (31%)
• Similarity: 110/289 - (38%)
• Gaps: 65/289 - (22%)

Mouse    27 GGPGGGDGAVG-GGPGYPRPQSAPHLPAPNPHAARQPPAYYAPRAREPSYPGGLYPAPAAACPYA 90
            ||.|||.||.| ||.|.....:|.:....|..|...|   ..|.|..|....|.|...:...|.:
  Fly   116 GGGGGGGGAGGTGGAGNANGGNAANANGQNNPAGGMP---VRPSACTPDSRVGGYLDTSGGSPVS 177

Mouse    91 CRGASPARPEQSPAPGAHPSPAPQPPAPPRHCAPGPTTPAVATGGSAPACPLLLADQGPAGP--- 152
            .||.| |....|.:.|              :...|.....|...|:..|........|.|..
  Fly   178 HRGGS-AGGNVSVSGG--------------NGNAGGVQSGVGVAGAGTAWNANCTISGAAAQTAA 227

Mouse   153 -----KGKEPVVYPWM----------KKIHVSAVNSSYNG------------------------- 177
                 :......||||          .|..:.:..:.|.|
  Fly   228 ASSLHQASNHTFYPWMAIAGECPEDPTKSKIRSDLTQYGGISTDMGKRYSESLAGSLLPDWLGTN 292

Mouse   178 GEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKD---H 239
            |..:|.|..|||.|.||||||||.|.|||||||||:||.|||:|||:||||||||||.||:   .
  Fly   293 GLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKEIQAI 357

Mouse   240 KLPNTKMRSSNTASAPAGPPGKAQTHSPH 268
            |..|.:.:.:....|.|.....|.....|
  Fly   358 KELNEQEKQAQAQKAAAAAAAAAAVQGGH 386

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hoxa4	NP_032291.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	19..70		16/43 (37%)
		PHA03247	<43..161	CDD:223021	22/125 (18%)
		Antp-type hexapeptide	159..164		4/14 (29%)
		Homeodomain	181..237	CDD:459649	42/55 (76%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	238..285		6/34 (18%)
Ubx	NP_536752.1	Homeodomain	296..352	CDD:459649	42/55 (76%)