DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hoxa2 and Drgx

DIOPT Version :10

Sequence 1:NP_034581.1 Gene:Hoxa2 / 15399 MGIID:96174 Length:372 Species:Mus musculus
Sequence 2:NP_001097075.2 Gene:Drgx / 5740176 FlyBaseID:FBgn0085369 Length:587 Species:Drosophila melanogaster


Alignment Length:309 Identity:76/309 - (24%)
Similarity:125/309 - (40%) Gaps:64/309 - (20%)


- Green bases have known domain annotations that are detailed below.


Mouse    88 PAGALQPPEYPWMKEKKAAKKTALPPAAASTGPACLGHKESLEIADGSGGGSRRLRTAYTNTQLL 152
            |.|. .||..|.:....||..   |..:.|..||.  |.|:.....     .||.||.:|..||.
  Fly    12 PCGP-HPPRLPTLDYPFAATH---PYTSYSYHPAI--HDETFVRRK-----QRRNRTTFTLQQLE 65

Mouse   153 ELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQCKENQNSEGKFKNLEDSD 217
            |||..|....|.....|.::|..::|||.:|:|||||||.|.::..:.|:.|.   |.:|.|.|.
  Fly    66 ELETAFAQTHYPDVFTREDLAMKINLTEARVQVWFQNRRAKWRKAERLKDEQR---KRENGESSS 127

Mouse   218 KVEEDEEEKSLFEQALSVSGALLE--------REGYTFQQNALSQQQAPNGHNGDSQTFP----- 269
            .:::..:.:   |.:..::|.:.:        :..::...|...:||..:.|:......|     
  Fly   128 SLDKLHDSR---ESSPDITGEIDDDMDDLPPRQRSHSPLANGQMEQQHSHSHSHSHSRSPGGGMH 189

Mouse   270 ------VSPLTSNE---------KNLKHFQHQSPTVPNCLSTMGQNC----GAGLNNDSPEAIEV 315
                  ..||:||:         ::|......||: |:.:....::.    |.|....||.    
  Fly   190 LDSSDNERPLSSNQLTATPHSASQSLGSISAGSPS-PSGMHREREHTPLVGGGGQGPSSPS---- 249

Mouse   316 PSLQDFNVFSTDSCLQLSDALSPSLPGSLDSPVDISADSFDFFTDTLTT 364
                  |..:|||.:::...:|.:....:.:..:.||.|    |.|.||
  Fly   250 ------NSRNTDSPIEVGGPMSLTTGSRMAASSNNSASS----TPTPTT 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hoxa2NP_034581.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 48..95 2/6 (33%)
Antp-type hexapeptide 96..101 1/4 (25%)
Homeodomain 140..196 CDD:459649 26/55 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 194..225 6/30 (20%)
DrgxNP_001097075.2 Homeodomain 53..109 CDD:459649 26/55 (47%)
OAR 428..446 CDD:461067
Blue background indicates that the domain is not in the aligned region.

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