DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hoxa2 and Ptx1

DIOPT Version :10

Sequence 1:NP_034581.1 Gene:Hoxa2 / 15399 MGIID:96174 Length:372 Species:Mus musculus
Sequence 2:NP_001138130.2 Gene:Ptx1 / 43664 FlyBaseID:FBgn0020912 Length:610 Species:Drosophila melanogaster


Alignment Length:410 Identity:88/410 - (21%)
Similarity:133/410 - (32%) Gaps:138/410 - (33%)


- Green bases have known domain annotations that are detailed below.


Mouse    10 GFINSQPSLAECLTSFPPVADTFQSSSIKTSTLSH------------STLIPPPFEQTIPSLNPG 62
            |...|..:.:..|:|....:.|.......||...|            |..|.|.....:| ::..
  Fly    76 GSAESATTTSTALSSGSTGSSTVNGGGSSTSGTEHLHSHHSLHDSSSSVSISPAISSLMP-ISSL 139

Mouse    63 SHPRHGAG---VGGRPKSSPAGSRGSPVPAGALQPPEYP----------W--------------- 99
            ||..|.||   |||.          |..|...:.||..|          |               
  Fly   140 SHLHHSAGQDLVGGY----------SQHPHHTVVPPHTPKHEPLEKLRIWAETGDFRDSHSSMTA 194

Mouse   100 ------------------------MKEKKAAKKTALPPAAASTGPACLGHKESLEIA------DG 134
                                    .:::|...::.......:...:..||.|.:..:      |.
  Fly   195 VANSLDSTHLNNFQTSSTSSISNRSRDRKDGNRSVNETTIKTENISSSGHDEPMTTSGEEPKNDK 259

Mouse   135 SGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMK-HKRQT 198
            .....||.||.:|:.||.|||..|..|:|.....|.|||...:|||.:|:|||:|||.| .||:.
  Fly   260 KNKRQRRQRTHFTSQQLQELEHTFSRNRYPDMSTREEIAMWTNLTEARVRVWFKNRRAKWRKRER 324

Mouse   199 QCKENQNSEGKFKNLEDSDKVEEDEEEKSLFEQALSVSGALLEREGYTFQQNALSQQQAPNGHNG 263
            .......:...||:...:..::...:: ||:.               ::..|..::..:|.|   
  Fly   325 NAMNAAVAAADFKSGFGTQFMQPFADD-SLYS---------------SYPYNNWTKVPSPLG--- 370

Mouse   264 DSQTF--PVSPLTSNEKNLKHFQHQSPTVPNCLSTMGQNCGAGLNNDSPEAIEVPSLQDFNVFST 326
             ::.|  ||:||.|.... .|  ||:..  ||.:|........:||.|                 
  Fly   371 -TKPFPWPVNPLGSMVAG-NH--HQNSV--NCFNTGASGVAVSMNNAS----------------- 412

Mouse   327 DSCLQLSDALSPSLPGSLDS 346
                        .||||:.|
  Fly   413 ------------MLPGSMGS 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hoxa2NP_034581.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 48..95 13/49 (27%)
Antp-type hexapeptide 96..101 2/53 (4%)
Homeodomain 140..196 CDD:459649 28/56 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 194..225 4/30 (13%)
Ptx1NP_001138130.2 Homeodomain 265..321 CDD:459649 28/55 (51%)

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