Protein Alignment Hoxa2 and ro

DIOPT Version :10

• Sequence 1: NP_034581.1
• Gene: Hoxa2 / 15399
• MGIID: 96174
• Length: 372
• Species: Mus musculus
• Sequence 2: NP_524521.1
• Gene: ro / 43234
• FlyBaseID: FBgn0003267
• Length: 350
• Species: Drosophila melanogaster
• Alignment Length: 338
• Identity: 80/338 - (23%)
• Similarity: 119/338 - (35%)
• Gaps: 103/338 - (30%)

Mouse     5 FEREIGFINSQPSLAECLTSFPPVADTFQSSSIKTSTLSHSTLIPPPFEQTIPSLNPGSHPRHGA 69
            |||..|.:.::.|               ::..|...|.:|.   |||.:.          |.|..
  Fly    45 FERLYGHLETRSS---------------ENGEIDVGTHAHK---PPPCDT----------PYHSD 81

Mouse    70 GVGGRPKSSPAGSRGSP-------------VPA-----GALQPPEYPWMKEK------------- 103
            |          ||..||             .||     .|...|::|..:.:
  Fly    82 G----------GSVSSPDISISDERTSLAAYPAYDFYGHAKDYPQHPSQQHQQHHHHHHHPPQLV 136

Mouse   104 -KAAKKTALPPAAASTGPA------------------CLGHKESLEIADGSGGGSRRLRTAYTNT 149
             :.....:.|||.|:.|.|                  ..|....|.......|..||.||.::..
  Fly   137 HQKLSYVSPPPAIAAGGAANPVLPHAFPAGFPSDPHFSAGFSAFLARRRRKEGRQRRQRTTFSTE 201

Mouse   150 QLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQCKENQNSEGKFKNLE 214
            |.|.||.|||.|:|:.|.||.|:|..|.|||.|:|:||||||.|.||..:.:.:|:    ::|.
  Fly   202 QTLRLEVEFHRNEYISRSRRFELAETLRLTETQIKIWFQNRRAKDKRIEKAQIDQH----YRNF- 261

Mouse   215 DSDKVEEDEEEKSLFEQALS------VSGALLEREGYTFQQNALSQQQAPNGHNGDSQTFPVSPL 273
                |..:....|:..||.:      |:|.:....|..:...|.:....|..:..|:....:...
  Fly   262 ----VVANGFMSSIMGQAATTMPPGGVTGGVAVGVGLNYYAAAATPAALPKDNTQDANFIDIDDQ 322

Mouse   274 TSNEKNLKHFQHQ 286
            ...::..|..|.|
  Fly   323 FQRQQQQKQQQQQ 335

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hoxa2	NP_034581.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	48..95		13/64 (20%)
		Antp-type hexapeptide	96..101		1/4 (25%)
		Homeodomain	140..196	CDD:459649	31/55 (56%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	194..225		5/30 (17%)
ro	NP_524521.1	Homeodomain	196..248	CDD:459649	28/51 (55%)