DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hoxa2 and lbe

DIOPT Version :10

Sequence 1:NP_034581.1 Gene:Hoxa2 / 15399 MGIID:96174 Length:372 Species:Mus musculus
Sequence 2:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster


Alignment Length:97 Identity:41/97 - (42%)
Similarity:51/97 - (52%) Gaps:11/97 - (11%)


- Green bases have known domain annotations that are detailed below.


Mouse   140 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQCKENQ 204
            |:.|||:||.|:.||||.|.:.|||....|.||||.|.|:..||..||||||.|.||..:     
  Fly   354 RKSRTAFTNHQIFELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQNRRAKQKRDIE----- 413

Mouse   205 NSEGKFKNLEDSDKVEEDEEEKSLFEQALSVS 236
                :.|  :|.|.|:.....||..|....:|
  Fly   414 ----ELK--KDFDSVKVFSAHKSFLENVNDLS 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hoxa2NP_034581.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 48..95
Antp-type hexapeptide 96..101
Homeodomain 140..196 CDD:459649 31/55 (56%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 194..225 6/30 (20%)
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 31/55 (56%)
Blue background indicates that the domain is not in the aligned region.

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