DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hoxa2 and ftz

DIOPT Version :9

Sequence 1:NP_034581.1 Gene:Hoxa2 / 15399 MGIID:96174 Length:372 Species:Mus musculus
Sequence 2:NP_477498.1 Gene:ftz / 40834 FlyBaseID:FBgn0001077 Length:410 Species:Drosophila melanogaster


Alignment Length:349 Identity:92/349 - (26%)
Similarity:130/349 - (37%) Gaps:114/349 - (32%)


- Green bases have known domain annotations that are detailed below.


Mouse     9 IGFINSQPSLAECLTSFP-------------PVADTFQSSSIKTSTLSHSTLIP-PPFEQ---TI 56
            |..:..:||....|.:.|             .|....::.::.|..    |..| |.::|   |:
  Fly    99 IAAVEERPSTLRALLTNPVKKLKYTPDYFYTTVEQVKKAPAVSTKV----TASPAPSYDQEYVTV 159

Mouse    57 PSLNPGSHPRHGAGVGGRPKSSPAGSRGSPVPAG--ALQPPEYPWMKEKKAAKKTALPP-AAAST 118
            |:      |.....|......||. |:...:..|  |..||..|          |:||| ...||
  Fly   160 PT------PSASEDVDYLDVYSPQ-SQTQKLKNGDFATPPPTTP----------TSLPPLEGIST 207

Mouse   119 GPACLGHKESLEIA-----------DGSGG---------------GSRRLRTAYTNTQLLELEKE 157
            .|...|.|.|..::           :|:|.               .|:|.|..||..|.||||||
  Fly   208 PPQSPGEKSSSAVSQEINHRIVTAPNGAGDFNWSHIEETLASDCKDSKRTRQTYTRYQTLELEKE 272

Mouse   158 FHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQCKENQNSEGKFKNLEDSDKVEED 222
            ||||:|:.|.||::||..|.|:|||:|:||||||||.|:                    |:..:.
  Fly   273 FHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKK--------------------DRTLDS 317

Mouse   223 EEEKSLFEQALSVSGALLEREGYTFQQNALSQQQAPNGHNGDSQTFPVSPLTSNEKNLKHFQHQS 287
            ..|.         .||     |||..   |...:|.:.....:.:.|| |:         :.|..
  Fly   318 SPEH---------CGA-----GYTAM---LPPLEATSTATTGAPSVPV-PM---------YHHHQ 355

Mouse   288 PTVPNCLSTMGQNCGAGLNNDSPE 311
            .|......:...:.|.||.||.|:
  Fly   356 TTAAYPAYSHSHSHGYGLLNDYPQ 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hoxa2NP_034581.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 48..95 12/52 (23%)
Antp-type hexapeptide 96..101 1/4 (25%)
Homeobox 143..195 CDD:278475 34/51 (67%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 194..225 2/30 (7%)
ftzNP_477498.1 FTZ 1..248 CDD:281812 35/169 (21%)
Homeobox 257..310 CDD:278475 34/52 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.900

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