DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hoxa2 and CG34031

DIOPT Version :10

Sequence 1:NP_034581.1 Gene:Hoxa2 / 15399 MGIID:96174 Length:372 Species:Mus musculus
Sequence 2:NP_001246894.1 Gene:CG34031 / 3885665 FlyBaseID:FBgn0054031 Length:219 Species:Drosophila melanogaster


Alignment Length:224 Identity:62/224 - (27%)
Similarity:89/224 - (39%) Gaps:60/224 - (26%)


- Green bases have known domain annotations that are detailed below.


Mouse     1 MNYEFEREIGFINSQPSLAECL-----TSFPPVADTFQSSSIKTSTLSHSTLIPPPFEQT----- 55
            ||...|::...:||      |:     |........|...||.:::.:||:....|.:.|     
  Fly     1 MNPHLEQDKSRLNS------CIEKSIQTKKKGKLGAFSIDSILSTSEAHSSQNSLPKDNTNVTSS 59

Mouse    56 -IPSLNPGSHPRHGAG---------VGGRPKSSPAGSRGSPVPAGALQPPEYPWMKEKKAAKKTA 110
             |..|...|..:.|..         ..|.|:..|....||.|       ..:.|..|        
  Fly    60 DISKLYAFSFTQEGNNKTPLTNFDLCQGHPRRLPITFDGSTV-------SRFVWRTE-------- 109

Mouse   111 LPPAAASTGPACLGHKESLE-------IADGSGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPR 168
                  |..|:.:.:..:|:       ..|      |:.|.||:.:||..||.||:.:|||...:
  Fly   110 ------SILPSYITNSTNLQEKQLRKRFTD------RKPRQAYSASQLERLENEFNLDKYLSVSK 162

Mouse   169 RVEIAALLDLTERQVKVWFQNRRMKHKRQ 197
            |||::..|.|||.|||.||||||.|.|:|
  Fly   163 RVELSKSLSLTEVQVKTWFQNRRTKWKKQ 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hoxa2NP_034581.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 48..95 12/61 (20%)
Antp-type hexapeptide 96..101 1/4 (25%)
Homeodomain 140..196 CDD:459649 30/55 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 194..225 2/4 (50%)
CG34031NP_001246894.1 Homeodomain 134..190 CDD:459649 30/55 (55%)

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