DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hoxa2 and en

DIOPT Version :10

Sequence 1:NP_034581.1 Gene:Hoxa2 / 15399 MGIID:96174 Length:372 Species:Mus musculus
Sequence 2:NP_523700.2 Gene:en / 36240 FlyBaseID:FBgn0000577 Length:552 Species:Drosophila melanogaster


Alignment Length:259 Identity:76/259 - (29%)
Similarity:105/259 - (40%) Gaps:74/259 - (28%)


- Green bases have known domain annotations that are detailed below.


Mouse    14 SQPSL---AECLTSFPPV--ADTFQS-SSIKTSTLSHSTLIPPPFEQTIPSLNPGSHPRHGAGVG 72
            :||.|   |..|.|.||.  |.|..| ||:.||:.|.|:    .......|||  |.|       
  Fly   315 TQPPLSSSASSLASPPPASNASTISSTSSVATSSSSSSS----GCSSAASSLN--SSP------- 366

Mouse    73 GRPKSSPAGSRGSPVPAGALQPPEYPWMKEKKAAKKTALPPAAAS--------------TGPACL 123
                ||..|:.||.|.|.:.||...|             ||:|.|              ||....
  Fly   367 ----SSRLGASGSGVNASSPQPQPIP-------------PPSAVSRDSGMESSDDTRSETGSTTT 414

Mouse   124 -GHKESL--------EIADGSGGGSR---------------RLRTAYTNTQLLELEKEFHFNKYL 164
             |.|..:        ..:|....|.|               |.|||:::.||..|::||:.|:||
  Fly   415 EGGKNEMWPAWVYCTRYSDRPSSGPRYRRPKQPKDKTNDEKRPRTAFSSEQLARLKREFNENRYL 479

Mouse   165 CRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQCKENQNSEGKFKNLEDSDKVEEDEEEKSL 228
            ...||.::::.|.|.|.|:|:||||:|.|.|:.|..|.....:...:.|.:...|...:||:.|
  Fly   480 TERRRQQLSSELGLNEAQIKIWFQNKRAKIKKSTGSKNPLALQLMAQGLYNHTTVPLTKEEEEL 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hoxa2NP_034581.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 48..95 13/46 (28%)
Antp-type hexapeptide 96..101 1/4 (25%)
Homeodomain 140..196 CDD:459649 26/70 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 194..225 5/30 (17%)
enNP_523700.2 Homeodomain 455..511 CDD:459649 25/55 (45%)
Engrail_1_C_sig 512..542 CDD:431338 6/29 (21%)

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