DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hoxa2 and unpg

DIOPT Version :10

Sequence 1:NP_034581.1 Gene:Hoxa2 / 15399 MGIID:96174 Length:372 Species:Mus musculus
Sequence 2:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster


Alignment Length:386 Identity:89/386 - (23%)
Similarity:130/386 - (33%) Gaps:140/386 - (36%)


- Green bases have known domain annotations that are detailed below.


Mouse    16 PSLAECLTS----FPPVADTFQSSSIKTSTLSHSTLIPPPFEQTIPSLNPGSHPRHGAGVG---- 72
            |:|...|.:    |.|.|     :.:..:.||:..|.....:..:.||:..:..:|.|..|    
  Fly   147 PTLPHPLDTRFLPFNPAA-----AGVAPTDLSYRRLAELMNQDYVHSLSVHARLQHMAAAGRMHE 206

Mouse    73 --GRP------KSSPAGSRGSPVPAGALQPPEYPWMKEKKAAKKTALPPAAASTGPAC------- 122
              ..|      :.:|..:..||..:|:..|.|        .|....:......:|.:|       
  Fly   207 DQANPGMAQLQEPTPPQAHSSPAKSGSHSPME--------PALDVGMDEDFECSGDSCSDISLTM 263

Mouse   123 ---------------------------------------LGHKESLEIADGSGGGSRRLRTAYTN 148
                                                   :|.|:|......|...|||.|||:|:
  Fly   264 SPRNYNGEMDKSRNGAYTNSDSEDCSDDEGAQSRHEGGGMGGKDSQGNGSSSNSKSRRRRTAFTS 328

Mouse   149 TQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQCKENQNSEGKFKNL 213
            .||||||:|||..|||....|.:||..|.|:|.|||:||||||.|.||   .|....|.|     
  Fly   329 EQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRAKWKR---VKAGLTSHG----- 385

Mouse   214 EDSDKVEEDEEEKSLFEQALSVSGALLEREGYTFQQNALSQQQAPNGHNGDSQTFPVSPLTSNEK 278
                                      |.|.|.|               :|.....|: |:..|..
  Fly   386 --------------------------LGRNGTT---------------SGTKIVVPI-PVHVNRF 408

Mouse   279 NLKHFQHQSPTVPNCLSTMGQNCGAGLNNDSPEAIEVPSLQDFNVFSTDSCLQLSDALSPS 339
            .::. |||.         :.:.|.:|...|..:.:...::..|..||..     ::|.|||
  Fly   409 AVRS-QHQQ---------LEKMCLSGPKPDLRKKLSAEAIGGFEKFSGS-----TNASSPS 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hoxa2NP_034581.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 48..95 10/58 (17%)
Antp-type hexapeptide 96..101 1/4 (25%)
Homeodomain 140..196 CDD:459649 34/55 (62%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 194..225 5/30 (17%)
unpgNP_477146.1 Homeodomain 324..376 CDD:459649 31/51 (61%)

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