Protein Alignment Hoxa1 and Antp

DIOPT Version :9

• Sequence 1: NP_034579.3
• Gene: Hoxa1 / 15394
• MGIID: 96170
• Length: 336
• Species: Mus musculus
• Sequence 2: NP_996167.1
• Gene: Antp / 40835
• FlyBaseID: FBgn0260642
• Length: 378
• Species: Drosophila melanogaster
• Alignment Length: 403
• Identity: 98/403 - (24%)
• Similarity: 137/403 - (33%)
• Gaps: 155/403 - (38%)

Mouse    42 VSANSCGGDDRFLVGRGVQISSPHHHHHH-----------HHHHHPQTATY-------------- 81
            :|.|:|.....:....  .:.:..||.|:           ..||:.|.|.:
  Fly     3 MSTNNCESMTSYFTNS--YMGADMHHGHYPGNGVTDLDAQQMHHYSQNANHQGNMPYPRFPPYDR 65

Mouse    82 -----------------------------------QTSGNLGI--SYSHSSCGPSYGAQNFSAPY 109
                                               ||:|.||:  ........||...|...|..
  Fly    66 MPYYNGQGMDQQQQHQVYSRPDSPSSQVGGVMPQAQTNGQLGVPQQQQQQQQQPSQNQQQQQAQQ 130

Mouse   110 GPYGLNQ---------------------------EADV-------SGGYPPCAPAVYSGNLSTPM 140
            .|..|.|                           :|.|       .||.||....:...:::..|
  Fly   131 APQQLQQQLPQVTQQVTHPQQQQQQPVVYASCKLQAAVGGLGMVPEGGSPPLVDQMSGHHMNAQM 195

Mouse   141 VQHHH--HHQGYAGGT-VGSPQYI-----HHSYGQEQQTLALATYNNSLSPLHA----------- 186
            ...||  |.|...|.| ||.|...     ||:.|..||       .:.:.|:.|
  Fly   196 TLPHHMGHPQAQLGYTDVGVPDVTEVHQNHHNMGMYQQ-------QSGVPPVGAPPQGMMHQGQG 253

Mouse   187 ----------SHQEACRSPASETSS-PAQTFDWMKVKRNPPKTGKVGEYGYVGQPNAVRTNFTTK 240
                      .|....::|.|::|. |:..:.||:           .::|...:....|..:|..
  Fly   254 PPQMHQGHPGQHTPPSQNPNSQSSGMPSPLYPWMR-----------SQFGKCQERKRGRQTYTRY 307

Mouse   241 QLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREK-EGLLPISPATPPGS 304
            |..|||||||||:||||.||:|||.:|.|.|.|:||||||||||.||..| :|        .|||
  Fly   308 QTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKG--------EPGS 364

Mouse   305 DEKTEESSEKSSP 317
            ..:.:|.:..:||
  Fly   365 GGEGDEITPPNSP 377

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hoxa1	NP_034579.3	COG5576	177..>287	CDD:227863	45/131 (34%)
		Homeobox	234..287	CDD:365835	35/52 (67%)
Antp	NP_996167.1	KLF1_2_4_N	<161..306	CDD:425360	32/162 (20%)
		Homeobox	301..354	CDD:395001	35/52 (67%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X14
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.810