Sequence 1: | NP_001288269.1 | Gene: | Hnrnpk / 15387 | MGIID: | 99894 | Length: | 464 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001246875.1 | Gene: | mub / 40436 | FlyBaseID: | FBgn0262737 | Length: | 573 | Species: | Drosophila melanogaster |
Alignment Length: | 445 | Identity: | 114/445 - (25%) |
---|---|---|---|
Similarity: | 175/445 - (39%) | Gaps: | 112/445 - (25%) |
- Green bases have known domain annotations that are detailed below.
Mouse 37 RNTDEMVEL--RILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGE 99
Mouse 100 ILKKIIPTLEEGLQL---PSPTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLAGGIIG 161
Mouse 162 VKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYD 226
Mouse 227 P-----------NFYDETYDYGGFTMMFDDRRGRPVGFPMR-GRGGFDRMPPGRGGRPMPPSRRD 279
Mouse 280 YDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPPPPPRGGDLMAYDRRGRPGDRYDGMVGFSADET 344
Mouse 345 WDSAIDTWSPSEWQMAYEPQGGSGYDYSYAGGRGSYGDLGGPIITTQ-----VTIPKDLAGSIIG 404
Mouse 405 KGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQIQNAQYLLQNSVK 456 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Hnrnpk | NP_001288269.1 | Necessary for interaction with DDX1. /evidence=ECO:0000250 | 1..276 | 69/255 (27%) | |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..37 | 114/445 (26%) | |||
ROKNT | 4..43 | CDD:400419 | 1/5 (20%) | ||
KH-I_HNRNPK_rpt1 | 42..105 | CDD:411860 | 20/64 (31%) | ||
2 X 22 AA approximate repeats | 54..421 | 91/386 (24%) | |||
5 X 4 AA repeats of G-X-G-G | 59..407 | 81/367 (22%) | |||
KH-I_HNRNPK_rpt2 | 144..213 | CDD:411861 | 24/68 (35%) | ||
Interaction with ZIK1. /evidence=ECO:0000269|PubMed:8910362 | 209..337 | 28/139 (20%) | |||
RNA-binding RGG-box | 236..273 | 9/37 (24%) | |||
2 X 6 AA approximate repeats | 245..329 | 16/84 (19%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 250..329 | 16/79 (20%) | |||
KH-I_HNRNPK_rpt3 | 387..460 | CDD:411862 | 34/78 (44%) | ||
mub | NP_001246875.1 | PCBP_like_KH | 25..86 | CDD:239089 | 18/60 (30%) |
PCBP_like_KH | 109..172 | CDD:239089 | 23/62 (37%) | ||
KH-I | 305..368 | CDD:238053 | 30/62 (48%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D394765at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1164 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.950 |