Protein Alignment Hnrnpab and Hrb87F

DIOPT Version :9

• Sequence 1: NP_001041526.1
• Gene: Hnrnpab / 15384
• MGIID: 1330294
• Length: 332
• Species: Mus musculus
• Sequence 2: NP_001163602.1
• Gene: Hrb87F / 48535
• FlyBaseID: FBgn0004237
• Length: 385
• Species: Drosophila melanogaster
• Alignment Length: 339
• Identity: 112/339 - (33%)
• Similarity: 163/339 - (48%)
• Gaps: 70/339 - (20%)

Mouse    56 NQNGAEGDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGF 120
            |.|..:|::|.   ..|...|:|:|||.:.|:...||.:|.|:|.:||..:..||.|.|||||||
  Fly     8 NGNYDDGEEIT---EPEQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGF 69

Mouse   121 ILFKDSSSVEKVLDQKEHRLDGRVIDPKKAMAMKK--DP-----VKKIFVGGLNPEATEEKIREY 178
            |.:..|..::...:.:.|::|||.::||:|:..::  .|     |||:|||||..:..||.:|||
  Fly    70 ITYSQSYMIDNAQNARPHKIDGRTVEPKRAVPRQEIDSPNAGATVKKLFVGGLRDDHDEECLREY 134

Mouse   179 FGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSGSKCEIKVAQPKEVYQQQ 243
            |..||:|.::.:..|....|:|||.||.|.:.|||.|::.:|.|::.....::|.|..|: ...:
  Fly   135 FKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLDVKKAIAKQ-DMDR 198

Mouse   244 QYGSGGRGNRNRGNRGS---------------------------------------GGGQ---SQ 266
            |.|.||||....|.||.                                       ||||   |.
  Fly   199 QGGGGGRGGPRAGGRGGQGDRGQGGGGWGGQNRQNGGGNWGGAGGGGGFGNSGGNFGGGQGGGSG 263

Mouse   267 SWNQ----GYGNYWNQG---YGYQQGYGPGYGGYDYSPY-------GYYGYGPGYDYSQGSTNYG 317
            .|||    |.|.:.|||   .|:..|.|.||||.:.:..       |..|.|.|.:|.|   :||
  Fly   264 GWNQQGGSGGGPWNNQGGGNGGWNGGGGGGYGGGNSNGSWGGNGGGGGGGGGFGNEYQQ---SYG 325

Mouse   318 KSQRRGGHQNNYKP 331
            ...:|..:..|.:|
  Fly   326 GGPQRNSNFGNNRP 339

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hnrnpab	NP_001041526.1	CBFNT	1..75	CDD:285369	5/18 (28%)
		RRM1_hnRNPAB	76..150	CDD:241201	31/73 (42%)
		RRM2_hnRNPAB	155..234	CDD:241028	33/85 (39%)
Hrb87F	NP_001163602.1	RRM1_hnRNPA_like	25..102	CDD:241022	32/76 (42%)
		RRM_SF	116..188	CDD:302621	29/71 (41%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1202220at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.920