Protein Alignment Hnrnpab and CG4612

DIOPT Version :9

• Sequence 1: NP_001041526.1
• Gene: Hnrnpab / 15384
• MGIID: 1330294
• Length: 332
• Species: Mus musculus
• Sequence 2: NP_001246493.1
• Gene: CG4612 / 37914
• FlyBaseID: FBgn0035016
• Length: 307
• Species: Drosophila melanogaster
• Alignment Length: 255
• Identity: 59/255 - (23%)
• Similarity: 119/255 - (46%)
• Gaps: 46/255 - (18%)

Mouse    18 NGHEAAPEGEAPVEPSAAAAAPAASAGSGGGTTTAPSGNQNGAEGDQINASKNEEDAGKMFVGGL 82
            :||.:...|.      .:.::.:|:.|.|.|.....||:..|:.|:      :..|:||:::..|
  Fly    68 HGHNSLGSGH------TSTSSHSANVGVGVGGGALASGSTGGSGGN------SSPDSGKIYIKNL 120

Mouse    83 SWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQKEHRLDGRVIDP 147
            ......|.:.|.|:.||.:::|.:..|.: |.|||:||:.|....:....::    :::|.:.:.
  Fly   121 ERSIDNKAVYDTFSVFGNILNCNVAKDED-GNSRGYGFVHFDSEEAARAAIE----KVNGMLCNN 180

Mouse   148 KKAMAMKKDP-----------VKKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRG 201
            :|...:|..|           .|.::|..|:.|.||:.:||.|..:|.|.:.:|.:|.:...||
  Fly   181 QKVHVVKFIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMFEPYGRITSHKLMLDEEGRSRR- 244

Mouse   202 FVFITFKEEDPV-----------KKVLEKKF----HTVSGSKCEIKVAQPKEVYQQQQYG 246
            |.|:.:  |:|.           |::.:.||    ..:|.::.:.::.:..|..::|:.|
  Fly   245 FGFVAY--ENPQSALAAVIGLHGKQLGDNKFLYVARALSKAERQQEINRKLEERKRQKAG 302

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hnrnpab	NP_001041526.1	CBFNT	1..75	CDD:285369	12/56 (21%)
		RRM1_hnRNPAB	76..150	CDD:241201	17/73 (23%)
		RRM2_hnRNPAB	155..234	CDD:241028	24/104 (23%)
CG4612	NP_001246493.1	RRM2_I_PABPs	115..185	CDD:240825	17/74 (23%)
		RRM3_I_PABPs	202..282	CDD:240826	22/82 (27%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	1	0.960