DRSC/TRiP Functional Genomics Resources

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Protein Alignment RNF145 and rnf145a

DIOPT Version :9

Sequence 1:NP_001186309.1 Gene:RNF145 / 153830 HGNCID:20853 Length:693 Species:Homo sapiens
Sequence 2:XP_005157379.1 Gene:rnf145a / 565986 ZFINID:ZDB-GENE-111012-3 Length:649 Species:Danio rerio


Alignment Length:640 Identity:534/640 - (83%)
Similarity:581/640 - (90%) Gaps:8/640 - (1%)


- Green bases have known domain annotations that are detailed below.


Human    31 MAAKEKLEAVLNVALRVPSIMLLDVLYRWDVSSFFQQIQRSSLSNNPLFQYKYLALNMHYVGYIL 95
            ||.||::||||||.|||||||||:||||||||||||:||||||:||||||||||||.:|||||||
Zfish     1 MAVKERVEAVLNVGLRVPSIMLLEVLYRWDVSSFFQKIQRSSLNNNPLFQYKYLALYLHYVGYIL 65

Human    96 SVVLLTLPRQHLVQLYLYFLTALLLYAGHQISRDYVRSELEFAYEGPMYLEPLSMNRFTTALIGQ 160
            |:||||||||||||||||.||||||:|||||||||||||||..||||:||||||:|||||||:.|
Zfish    66 SLVLLTLPRQHLVQLYLYVLTALLLFAGHQISRDYVRSELESGYEGPLYLEPLSINRFTTALLCQ 130

Human   161 LVVCTLCSCVMKTKQIWLFSAHMLPLLARLCLVPLETIVIINKFAMIFTGLEVLYFLGSNLLVPY 225
            |||||||||||:||:|||||||:|||:||||||||||||.:|:||||||||||:|||.||||||:
Zfish   131 LVVCTLCSCVMQTKRIWLFSAHLLPLVARLCLVPLETIVFVNRFAMIFTGLEVIYFLASNLLVPF 195

Human   226 NLAKSAYRELVQVVEVYGLLALGMSLWNQLVVPVLFMVFWLVLFALQIYSYFSTRDQPASRERLL 290
            ||||:|||||.||||||||||||||||||||:|||||.|||||||||||:||||||||.||||||
Zfish   196 NLAKTAYRELAQVVEVYGLLALGMSLWNQLVLPVLFMCFWLVLFALQIYTYFSTRDQPTSRERLL 260

Human   291 FLFLTSIAECCSTPYSLLGLVFTVSFVALGVLTLCKFYLQGYRAFMNDPAMNRGMTEGVTLLILA 355
            |||||||||||.||||||||||||||||||||||||||||||||||||..|:||||||:||||||
Zfish   261 FLFLTSIAECCCTPYSLLGLVFTVSFVALGVLTLCKFYLQGYRAFMNDNTMHRGMTEGITLLILA 325

Human   356 VQTGLIELQVVHRAFLLSIILFIVVASILQSMLEIADPIVLALGASRDKSLWKHFRAVSLCLFLL 420
            ||||||||||:||||||||||||||||||||||||||||||||||||||||||||||||||||||
Zfish   326 VQTGLIELQVIHRAFLLSIILFIVVASILQSMLEIADPIVLALGASRDKSLWKHFRAVSLCLFLL 390

Human   421 VFPAYMAYMICQFFHMDFWLLIIISSSILTSLQVLGTLFIYVLFMVEEFRKEPVENMDDVIYYVN 485
            ||||||:|||||||||||||||||||||||||||||||.|||||||||.||.||||||||||:||
Zfish   391 VFPAYMSYMICQFFHMDFWLLIIISSSILTSLQVLGTLLIYVLFMVEELRKAPVENMDDVIYWVN 455

Human   486 GTYRLLEFLVALCVVAYGVSETIFGEWTVMGSMIIFIHSYYNVWLRAQLGWKSFLLRRDAVNKIK 550
            ||||||||||||||||||||||:|||||||||.|:.|||||||||||||||:|||||||||||||
Zfish   456 GTYRLLEFLVALCVVAYGVSETVFGEWTVMGSTIVLIHSYYNVWLRAQLGWQSFLLRRDAVNKIK 520

Human   551 SLPIATKEQLEKHNDICAICYQDMKSAVITPCSHFFHAGCLKKWLYVQETCPLCHCHLKNSSQLP 615
            |||.|:.:||::|||||:||||||.|||||||||.||||||||||||||||||||..||.|||| 
Zfish   521 SLPTASLQQLQQHNDICSICYQDMTSAVITPCSHLFHAGCLKKWLYVQETCPLCHNQLKGSSQL- 584

Human   616 GLGTEPVLQPHAGAEQNVMFQEGTEPPGQEHTPGTRIQEGSRDNNEYIARRPDNQ 670
            |..::.| .|.....|....|:.:||...|    :.:|:..:|::.  .|.|.::
Zfish   585 GSSSQDV-PPQDTPAQPEEDQDPSEPADSE----SNLQDLRQDDSS--TRAPASE 632

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RNF145NP_001186309.1 TRC8_N 38..536 CDD:290425 451/497 (91%)
zf-rbx1 <564..605 CDD:289448 37/40 (93%)
zf-RING_2 565..605 CDD:290367 36/39 (92%)
rnf145aXP_005157379.1 TRC8_N 8..506 CDD:290425 451/497 (91%)
zf-RING_2 535..575 CDD:290367 36/39 (92%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C194341076
Domainoid 1 1.000 912 1.000 Domainoid score I563
eggNOG 1 0.900 - - E1_COG5243
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 1059 1.000 Inparanoid score I2054
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG46488
OrthoDB 1 1.010 - - D119734at7742
OrthoFinder 1 1.000 - - FOG0006288
OrthoInspector 1 1.000 - - otm27927
orthoMCL 1 0.900 - - OOG6_109881
Panther 1 1.100 - - LDO PTHR22763
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R7680
SonicParanoid 1 1.000 - - X4575
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 1 1.500 - -
1717.300

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