DRSC/TRiP Functional Genomics Resources

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Protein Alignment ADRB1 and LOC116412276

DIOPT Version :9

Sequence 1:NP_000675.1 Gene:ADRB1 / 153 HGNCID:285 Length:477 Species:Homo sapiens
Sequence 2:XP_031762027.1 Gene:LOC116412276 / 116412276 -ID:- Length:389 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ADRB1NP_000675.1 7tm_4 67..>266 CDD:304433
7tm_1 75..377 CDD:278431
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 269..307
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 403..477
PDZ-Binding 474..477
LOC116412276XP_031762027.1 7tmA_Beta1_AR 38..336 CDD:320624
TM helix 1 39..63 CDD:320624
TM helix 2 72..94 CDD:320624
TM helix 3 110..132 CDD:320624
TM helix 4 155..171 CDD:320624
TM helix 5 201..224 CDD:320624
TM helix 6 272..294 CDD:320624
TM helix 7 305..330 CDD:320624
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 411 1.000 Domainoid score I5677
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 486 1.000 Inparanoid score I7867
NCBI 1 1.000 - -
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002077
OrthoInspector 1 1.000 - - oto148831
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X822
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.050

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