DRSC/TRiP Functional Genomics Resources

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Protein Alignment CUX1 and coy1

DIOPT Version :10

Sequence 1:NP_001189472.1 Gene:CUX1 / 1523 HGNCID:2557 Length:1516 Species:Homo sapiens
Sequence 2:NP_587840.1 Gene:coy1 / 2539476 PomBaseID:SPCC364.04C Length:633 Species:Schizosaccharomyces pombe


Alignment Length:586 Identity:147/586 - (25%)
Similarity:270/586 - (46%) Gaps:108/586 - (18%)


- Green bases have known domain annotations that are detailed below.


Human    12 WKRFDLQQLQRELDATATVLANRQDESEQSRKRLIEQSREFKKNTPEDLRKQVAPLLKSFQGEID 76
            ||....::||||.|..|..:...|..|...||.|..:::||:|...|....::..|||.:|..||
pombe    16 WKNSRFEELQREADEAAAEIEKMQKTSLDERKELSSKTKEFRKQPDEVKLGEMKGLLKLYQSGID 80

Human    77 ALSKRSKEAEAAFLNVYKRLIDVPDPVPALDLGQQLQLKVQR-LHDIETENQKLRETLEEYNKEF 140
            :|:||:|.|||.|..||:.|.:||||.|.| :.....||.|: :.|::.|.:::..:|:...|..
pombe    81 SLTKRAKSAEATFFRVYETLGEVPDPYPLL-IEAANNLKTQKQIEDLKKEKEEMEGSLQGKEKLE 144

Human   141 AEVKNQEVTIKALKEKIREYEQTLKNQAETIALEKEQKLQNDFAEKERKLQETQMSTTSKLEEAE 205
            .||:|       |::::.:|:..::.:||..|...:::.:..:.|:::..::.:....|.:::..
pombe   145 REVEN-------LRKELDKYKDLVETEAEKRAAITKEECEKSWLEQQKLYKDMEQENASTIQKLT 202

Human   206 HKVQSLQTALEKTRTEL-FDLKTKYDE----ETTAKADEIEMIMTDLERANQ-----RAEVAQRE 260
            .|::.||.      ::| .||:...:|    :..||:.|:..|:::|:.||:     :||:|..:
pombe   203 SKIRELQA------SQLDHDLQASQNESAGLDVNAKSAEVNAILSELDDANKIIVELQAEIAVLK 261

Human   261 AETLREQLSSANHSLQLASQIQKAPDVEQAIEVLTRSSLEVELAAKEREIAQLVEDVQRLQASLT 325
            ..| :||.|.::.. .|::|.::..|...::.....:.||....|..:|:......:|.|:..:.
pombe   262 QNT-KEQKSGSSQD-DLSNQQKQQLDFMDSLNKKLSTELESIKEASRKEMETHCATIQTLENEVK 324

Human   326 KLRENSASQISQLEQQLSAKNSTLKQLEEKLKGQADYEEVKKELNILKSMEFAPSEGAGTQDAAK 390
            :.|:..       |:.|:..|..           :||:|:|:||::||.:||: .|.|..::.: 
pombe   325 EARKVK-------EESLTLANKF-----------SDYDEIKRELSVLKQIEFS-GEHATHENTS- 369

Human   391 PLEVLLLEKNRSLQSENAALRISNSDLSGSARRKGKDQPESRRPGSLPAPPPSQLPRNPGE---- 451
             ||..||::.:.|..|.|.||.:|:.|:....::.|......:..|.......:|.::..:    
pombe   370 -LESQLLKREKQLSEELAKLRSTNAQLTDRITQESKKASFLEQKASEQEEVIRKLEKDLADVDVE 433

Human   452 ---QASNT----NGTH-QFSPA----GLSQDFFSSSLAS------------------------PS 480
               ..|||    .||. |.||.    |.:...|:.|:.|                        .:
pombe   434 GSVYLSNTTYRREGTSGQLSPTSSIMGGNPSLFNGSVLSRNSVNETGSAIVDVIKQQRDRFRRAN 498

Human   481 LPL-----ASTGKFAL-----------NSLLQRQL-MQSFYSKAMQEAGSTSMIFSTGPYSTNSI 528
            :.|     |:..|.||           |:||..|: .:..|.|.::.  |:|.:.:...|. |||
pombe   499 VTLVNQVSAANDKIALLESKLEEVEKSNTLLYEQMRFRDHYQKHVEP--SSSHLQTAAAYE-NSI 560

Human   529 S 529
            |
pombe   561 S 561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CUX1NP_001189472.1 SMC_prok_B <107..411 CDD:274008 70/314 (22%)
CUT 558..634 CDD:460543
PHA03247 758..>944 CDD:223021
CUT 950..1018 CDD:460543
CUT 1133..1210 CDD:460543
Homeodomain 1256..1312 CDD:459649
PHA03307 <1325..>1398 CDD:223039
coy1NP_587840.1 SMC_prok_B <117..428 CDD:274008 77/346 (22%)
CASP_C 404..621 CDD:462392 33/161 (20%)
Blue background indicates that the domain is not in the aligned region.

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