DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hes5 and E(spl)m5-HLH

DIOPT Version :10

Sequence 1:XP_006538625.3 Gene:Hes5 / 15208 MGIID:104876 Length:415 Species:Mus musculus
Sequence 2:NP_524511.1 Gene:E(spl)m5-HLH / 43158 FlyBaseID:FBgn0002631 Length:178 Species:Drosophila melanogaster


Alignment Length:226 Identity:42/226 - (18%)
Similarity:78/226 - (34%) Gaps:87/226 - (38%)


- Green bases have known domain annotations that are detailed below.


Mouse   229 LSPKEKN------------RLRKPVVEKMRRDRINSSIEQLKLLLEQEFARHQPNSKLEKADILE 281
            ::|:..|            :::||::|:.||.|:|..::.||.|: .||.......:::||::||
  Fly     1 MAPQSNNSTTFVSKTQHYLKVKKPLLERQRRARMNKCLDTLKTLV-AEFQGDDAILRMDKAEMLE 64

Mouse   282 MAVSYLKHSKGEPGACARLLLPADVAPTARAPLMPLRLPTAFAAAAGPKSLHQDYSEGYSWCLQE 346
            .|:.:::..                ....:||:.||.:              ..:..||...:.|
  Fly    65 AALVFMRKQ----------------VVKQQAPVSPLPM--------------DSFKNGYMNAVSE 99

Mouse   347 -----------------------AVQFLTLHAASDTQMKLLYHFQRPPAPAAPA----KEPPAPG 384
                                   .|:|..:..|...|..:.....||.:||:..    .|.....
  Fly   100 ISRVMACTPAMSVDVGKTVMTHLGVEFQRMLQADQVQTSVTTSTPRPLSPASSGYHSDNEDSQSA 164

Mouse   385 AAPQPARSSAKAAAAAVSTSRQPACGLWRPW 415
            |:|:|...:                 :||||
  Fly   165 ASPKPVEET-----------------MWRPW 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hes5XP_006538625.3 bHLH-O_HES5 236..292 CDD:381467 17/55 (31%)
ORANGE 334..369 CDD:128787 7/57 (12%)
E(spl)m5-HLHNP_524511.1 bHLH-O_ESM5_like 20..78 CDD:381486 17/74 (23%)
ORANGE 87..131 CDD:128787 5/43 (12%)

Return to query results.
Submit another query.