Sequence 1: | NP_001347009.1 | Gene: | Herc2 / 15204 | MGIID: | 103234 | Length: | 4836 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_523943.1 | Gene: | Rcc1 / 38669 | FlyBaseID: | FBgn0002638 | Length: | 547 | Species: | Drosophila melanogaster |
Alignment Length: | 497 | Identity: | 125/497 - (25%) |
---|---|---|---|
Similarity: | 191/497 - (38%) | Gaps: | 93/497 - (18%) |
- Green bases have known domain annotations that are detailed below.
Mouse 2952 LESTATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYS 3016
Mouse 3017 CGEATNGRLGLGMS-SGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD--G 3078
Mouse 3079 KLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGH-------GD 3136
Mouse 3137 ---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR--GG 3190
Mouse 3191 SEGCNIPQNIERLNGQGVCQIECGAQFSLALT---KSGVVWTWGKGDYFRLGHG--SDVHVRKPQ 3250
Mouse 3251 VVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLV--QGLEGQKIT 3313
Mouse 3314 RVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPLGASYL------------------------- 3353
Mouse 3354 -GVPSDADSSSSSNKISGANNC------------KPNRPSLA 3382 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Herc2 | NP_001347009.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 58..90 | ||
RCC1 1-1 | 416..462 | ||||
RCC1 1-2 | 463..513 | ||||
ATS1 | <494..787 | CDD:227511 | |||
RCC1 1-3 | 514..569 | ||||
RCC1 1-4 | 570..621 | ||||
RCC1 1-5 | 624..675 | ||||
RCC1 1-6 | 676..727 | ||||
RCC1 1-7 | 729..779 | ||||
Cyt-b5 | 1212..1283 | CDD:365921 | |||
MIB_HERC2 | 1871..1930 | CDD:369043 | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 2351..2376 | ||||
UBA_HERC2 | 2461..2508 | CDD:270585 | |||
Cul7 | 2555..2632 | CDD:371573 | |||
SH3_15 | 2640..2697 | CDD:375773 | |||
ZZ_HERC2 | 2707..2751 | CDD:239084 | |||
APC10-HERC2 | 2766..2911 | CDD:176485 | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 2928..2947 | ||||
ATS1 | 2957..3323 | CDD:227511 | 108/393 (27%) | ||
RCC1 2-1 | 2959..3010 | 11/50 (22%) | |||
RCC1 2-2 | 3011..3065 | 15/54 (28%) | |||
RCC1 2-3 | 3066..3117 | 16/52 (31%) | |||
RCC1 2-4 | 3119..3169 | 15/65 (23%) | |||
RCC1 2-5 | 3172..3223 | 12/55 (22%) | |||
RCC1 2-6 | 3225..3275 | 22/51 (43%) | |||
RCC1 2-7 | 3276..3327 | 12/52 (23%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 3479..3499 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 3517..3537 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 3604..3632 | ||||
RCC1 3-1 | 3953..4004 | ||||
RCC1 3-2 | 4006..4058 | ||||
ATS1 | 4025..4330 | CDD:227511 | |||
RCC1 3-3 | 4060..4110 | ||||
RCC1 3-4 | 4112..4164 | ||||
RCC1 3-5 | 4166..4216 | ||||
RCC1 3-6 | 4218..4268 | ||||
RCC1 3-7 | 4270..4320 | ||||
HECTc | 4423..4794 | CDD:238033 | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 4806..4836 | ||||
Rcc1 | NP_523943.1 | RCC1 | 42..89 | CDD:278826 | 11/47 (23%) |
RCC1 | 92..141 | CDD:278826 | 14/52 (27%) | ||
RCC1_2 | 131..158 | CDD:290274 | 10/26 (38%) | ||
RCC1 | 144..193 | CDD:278826 | 15/50 (30%) | ||
RCC1_2 | 182..209 | CDD:290274 | 10/26 (38%) | ||
RCC1 | 363..414 | CDD:278826 | 12/50 (24%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5184 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.820 |