DRSC/TRiP Functional Genomics Resources

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Protein Alignment ADRA2C and Oamb

DIOPT Version :9

Sequence 1:NP_000674.2 Gene:ADRA2C / 152 HGNCID:283 Length:462 Species:Homo sapiens
Sequence 2:NP_001262774.1 Gene:Oamb / 43982 FlyBaseID:FBgn0024944 Length:751 Species:Drosophila melanogaster


Alignment Length:611 Identity:159/611 - (26%)
Similarity:232/611 - (37%) Gaps:231/611 - (37%)


- Green bases have known domain annotations that are detailed below.


Human    39 WGPPRGQYSAGAVAGLAAVVGFLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATL 103
            |..|....|       .||:.|:.|..:.||.||:.||..|..||:..|.|:|:||.||:||...
  Fly    15 WTEPANLIS-------LAVLEFINVLVIGGNCLVIAAVFCSNKLRSVTNFFIVNLAVADLLVGLA 72

Human   104 VMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIVHLCAISLDRYWSVTQAVEYNLKRTPRRV 168
            |:|||...|:...|.||.:||.::||:||..||:||::|||||||||.:||:.|.|....:.::.
  Fly    73 VLPFSATWEVFKVWIFGDLWCRIWLAVDVWMCTASILNLCAISLDRYVAVTRPVTYPSIMSTKKA 137

Human   169 KATIVAVWLISAVISFPPLV--------------------------------------------- 188
            |:.|..:|::|..|.|||||                                             
  Fly   138 KSLIAGIWVLSFFICFPPLVGWKDQKAVIQPTYPKGNHTLYYTTTMSSSEDGQLGLDSIKDQGEA 202

Human   189 SLYRQP----DGAAY-------------------------------------------------- 199
            ||...|    :|.||                                                  
  Fly   203 SLPPSPPHIGNGNAYNPYDPGFAPIDGSAEIRIAAIDSTSTSTTATTTTTASSSSTTETEMDLDL 267

Human   200 --------PQ---------CGLNDETWYILSSCIGSFFAPCLIMGLVYARIYRVAKLRTRTLS-- 245
                    ||         |.|.::..|:|.|.:|||:.|..:|...|.||||.|...||.::  
  Fly   268 LNAPPQNRPQTISGSCPWKCELTNDRGYVLYSALGSFYIPMFVMLFFYWRIYRAAVRTTRAINQG 332

Human   246 ---------------EKRAPV------------------------------GPDGAS-------- 257
                           |:|..:                              .|:..|        
  Fly   333 FKTTKGSKGIGSRFEEQRLTLRIHRGRGSNQQDSMHSNGSTQSTTTTLGTPSPERLSKYATRRLH 397

Human   258 -----------PTTENGLGAAAGAGENGHCAPPPADVEPDESSAAAERRRRRGAL------RRGG 305
                       |::|| :...||.|:.||                 |||:...||      ...|
  Fly   398 HHDKIKISVSYPSSEN-ISELAGHGDVGH-----------------ERRQSGNALFAVHYNGTNG 444

Human   306 RR-------RAGAEGGAGGADGQGAGPGAAESGALTASRSPGPGGRLSRASSRSVEFFLSRRRRA 363
            |.       |...:.|...:.....|.|..|.....::.|...|...||.:::.:     .||..
  Fly   445 RESTESQLYRQQQQHGVASSCYLQVGKGLPELARRQSNTSEAGGSGHSRPANKKM-----GRRNI 504

Human   364 RSSVCRRKVAQAREKRFTFVLAVVMGVFVLCWFPFFFSYSLYGICREACQVPGPLFKFFFWIGYC 428
            ::.|.|.::    |.:....||:::|:|:.||.|||..|.:...|:: |..| .||...||:|||
  Fly   505 KAQVKRFRM----ETKAAKTLAIIVGMFIFCWCPFFTMYIIRPFCQD-CVDP-LLFSVLFWLGYC 563

Human   429 NSSLNPVIYTVFNQDFRRSFKHILFR 454
            ||::||:||.:|::|||.:||.|:.|
  Fly   564 NSAVNPMIYALFSKDFRFAFKRIICR 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ADRA2CNP_000674.2 7tmA_alpha2C_AR 60..448 CDD:320446 150/582 (26%)
TM helix 2 86..112 CDD:320446 13/25 (52%)
TM helix 3 124..154 CDD:320446 18/29 (62%)
TM helix 4 166..189 CDD:320446 10/67 (15%)
TM helix 5 207..236 CDD:320446 12/28 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 246..347 26/162 (16%)
TM helix 6 375..405 CDD:320446 11/29 (38%)
TM helix 7 416..441 CDD:320446 13/24 (54%)
OambNP_001262774.1 7tm_4 29..>154 CDD:304433 56/124 (45%)
7tm_1 37..>181 CDD:278431 59/143 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
21.870

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