DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CTSV and Swim

DIOPT Version :10

Sequence 1:NP_001324.2 Gene:CTSV / 1515 HGNCID:2538 Length:334 Species:Homo sapiens
Sequence 2:NP_611652.2 Gene:Swim / 37537 FlyBaseID:FBgn0034709 Length:431 Species:Drosophila melanogaster


Alignment Length:247 Identity:82/247 - (33%)
Similarity:116/247 - (46%) Gaps:37/247 - (14%)


- Green bases have known domain annotations that are detailed below.


Human   114 LPKSVD----WRKKGYVTPVKNQKQCGSCWAFSATGALEGQM-FRKTGK-LVSLSEQNLVDCSRP 172
            ||.|.:    |  ..|::.|.:|..||:.|..|.|.....:. .:..|| .|.||.||::.|:|.
  Fly   187 LPSSFNALDKW--SSYISEVPDQGWCGASWVLSTTSVASDRFAIQSKGKENVQLSAQNILSCTRR 249

Human   173 QGNQGCNGGFMARAFQYVKENGGLDSEESYPYVAVDEICKYR-------------PENSVANDTG 224
            |  |||.||.:..|::|:.:.|.:| |..|||....:.||.|             |.| |..|:.
  Fly   250 Q--QGCEGGHLDAAWRYLHKKGVVD-ENCYPYTQHRDTCKIRHNSRSLRANGCQKPVN-VDRDSL 310

Human   225 FTV---VAPGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLD--HGVLVVGY 284
            :||   .:..:|..:|..:...||:...|......|. |..|:|.|...:.|...  |.|.:||:
  Fly   311 YTVGPAYSLNREADIMAEIFHSGPVQATMRVNRDFFA-YSGGVYRETAANRKAPTGFHSVKLVGW 374

Human   285 GFEGANSNNSKYWLVKNSWGPEWGSNGYVKIAKDKNNHCGIA--TAASYPNV 334
            |.|   .|..|||:..||||..||.:||.:|.:. :|.|||.  ..||:|.|
  Fly   375 GEE---HNGEKYWIAANSWGSWWGEHGYFRILRG-SNECGIEEYVLASWPYV 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CTSVNP_001324.2 Inhibitor_I29 29..87 CDD:214853
Peptidase_C1 114..332 CDD:425470 80/243 (33%)
SwimNP_611652.2 Somatomedin_B 41..84 CDD:460034
Peptidase_C1A_CathepsinB 188..417 CDD:239111 77/239 (32%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.