DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hand2 and Fer1

DIOPT Version :9

Sequence 1:NP_034532.3 Gene:Hand2 / 15111 MGIID:103580 Length:217 Species:Mus musculus
Sequence 2:NP_001262334.1 Gene:Fer1 / 2768661 FlyBaseID:FBgn0037475 Length:256 Species:Drosophila melanogaster


Alignment Length:122 Identity:45/122 - (36%)
Similarity:62/122 - (50%) Gaps:25/122 - (20%)


- Green bases have known domain annotations that are detailed below.


Mouse    95 PRPVK-------RRGTANRKERRRTQSINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLM 152
            ||.:|       :|..||.:||||.||||.||..||..||.:|.:.:|||:.||:||.|||.:|.
  Fly    75 PRRLKCASQMAQQRQAANLRERRRMQSINEAFEGLRTHIPTLPYEKRLSKVDTLKLAISYITFLS 139

Mouse   153 DLLAKDDQNGEAEAFKAEIKKTDVKEEKRKKELNEILKSTVSSNDKKTKGRTGWPQH 209
            ::: |.|:||.....  .:::...||..:|..|               |.|||...|
  Fly   140 EMV-KKDKNGNEPGL--SLQRNYQKEPPKKIIL---------------KDRTGGVAH 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hand2NP_034532.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 76..116 12/27 (44%)
bHLH_TS_HAND2 100..161 CDD:381477 31/60 (52%)
Fer1NP_001262334.1 HLH 92..144 CDD:197674 27/52 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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