DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ADRA2B and Oamb

DIOPT Version :9

Sequence 1:NP_000673.2 Gene:ADRA2B / 151 HGNCID:282 Length:450 Species:Homo sapiens
Sequence 2:NP_001262774.1 Gene:Oamb / 43982 FlyBaseID:FBgn0024944 Length:751 Species:Drosophila melanogaster


Alignment Length:592 Identity:158/592 - (26%)
Similarity:238/592 - (40%) Gaps:192/592 - (32%)


- Green bases have known domain annotations that are detailed below.


Human    17 AAITFLILFTIFGNALVILAVLTSRSLRAPQNLFLVSLAAADILVATLIIPFSLANELLGYWYFR 81
            |.:.|:.:..|.||.|||.||..|..||:..|.|:|:||.||:||...::|||...|:...|.|.
  Fly    25 AVLEFINVLVIGGNCLVIAAVFCSNKLRSVTNFFIVNLAVADLLVGLAVLPFSATWEVFKVWIFG 89

Human    82 RTWCEVYLALDVLFCTSSIVHLCAISLDRYWAVSRALEYNSKRTPRRIKCIILTVWLIAAVISLP 146
            ..||.::||:||..||:||::|||||||||.||:|.:.|.|..:.::.|.:|..:|:::..|..|
  Fly    90 DLWCRIWLAVDVWMCTASILNLCAISLDRYVAVTRPVTYPSIMSTKKAKSLIAGIWVLSFFICFP 154

Human   147 PLI------------Y-KG------------------------DQG------------------- 155
            ||:            | ||                        |||                   
  Fly   155 PLVGWKDQKAVIQPTYPKGNHTLYYTTTMSSSEDGQLGLDSIKDQGEASLPPSPPHIGNGNAYNP 219

Human   156 --------------------------------------------------PQPRGRPQ------- 163
                                                              ..|:.|||       
  Fly   220 YDPGFAPIDGSAEIRIAAIDSTSTSTTATTTTTASSSSTTETEMDLDLLNAPPQNRPQTISGSCP 284

Human   164 --CKLNQEAWYILASSIGSFFAPCLIMILVYLRIYLIAKRSNR---------RGPRAKGG----- 212
              |:|..:..|:|.|::|||:.|..:|:..|.|||..|.|:.|         :|.:..|.     
  Fly   285 WKCELTNDRGYVLYSALGSFYIPMFVMLFFYWRIYRAAVRTTRAINQGFKTTKGSKGIGSRFEEQ 349

Human   213 -------PGQGESKQPRPDHGGALASAKL------PALASVASAREVNGH--------------- 249
                   .|:|.::|......|:..|...      |...|..:.|.::.|               
  Fly   350 RLTLRIHRGRGSNQQDSMHSNGSTQSTTTTLGTPSPERLSKYATRRLHHHDKIKISVSYPSSENI 414

Human   250 SKSTGEKEEGETPEDTGTRALPPSWAALPNSGQGQKEGVCGASPEDEAEEEEEEEEEEEECEPQA 314
            |:..|..:.|.....:|....     |:..:|...:|     |.|.:...::::.          
  Fly   415 SELAGHGDVGHERRQSGNALF-----AVHYNGTNGRE-----STESQLYRQQQQH---------- 459

Human   315 VPVSPASACSPPLQQPQGSRVLATLRGQVLLGRGVG---AIGGQWWRR--RAQLTR---EKRFTF 371
               ..||:|.  ||..:|...||..:.......|.|   ....:..||  :||:.|   |.:...
  Fly   460 ---GVASSCY--LQVGKGLPELARRQSNTSEAGGSGHSRPANKKMGRRNIKAQVKRFRMETKAAK 519

Human   372 VLAVVIGVFVLCWFPFFFSYSLGAICPKHCKVPHGLFQFFFWIGYCNSSLNPVIYTIFNQDFRRA 436
            .||:::|:|:.||.|||..|.:...| :.|..|. ||...||:|||||::||:||.:|::|||.|
  Fly   520 TLAIIVGMFIFCWCPFFTMYIIRPFC-QDCVDPL-LFSVLFWLGYCNSAVNPMIYALFSKDFRFA 582

Human   437 FRRILCR 443
            |:||:||
  Fly   583 FKRIICR 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ADRA2BNP_000673.2 7tmA_alpha2B_AR 7..437 CDD:320444 152/584 (26%)
TM helix 1 14..40 CDD:320444 10/22 (45%)
TM helix 2 47..73 CDD:320444 12/25 (48%)
TM helix 3 85..115 CDD:320444 19/29 (66%)
TM helix 4 127..150 CDD:320444 7/34 (21%)
TM helix 5 169..198 CDD:320444 12/28 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 204..229 7/45 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 241..329 15/102 (15%)
TM helix 6 364..394 CDD:320444 12/32 (38%)
TM helix 7 405..430 CDD:320444 13/24 (54%)
OambNP_001262774.1 7tm_4 29..>154 CDD:304433 55/124 (44%)
7tm_1 37..>181 CDD:278431 59/143 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.