DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ADRA2B and Adra2b

DIOPT Version :9

Sequence 1:NP_000673.2 Gene:ADRA2B / 151 HGNCID:282 Length:450 Species:Homo sapiens
Sequence 2:NP_612514.2 Gene:Adra2b / 24174 RGDID:2057 Length:453 Species:Rattus norvegicus


Alignment Length:451 Identity:380/451 - (84%)
Similarity:405/451 - (89%) Gaps:4/451 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MDHQDPYSVQATAAIAAAITFLILFTIFGNALVILAVLTSRSLRAPQNLFLVSLAAADILVATLI 65
            ||||:|||||||||||:||||||||||||||||||||||||||||||||||||||||||||||||
  Rat     6 MDHQEPYSVQATAAIASAITFLILFTIFGNALVILAVLTSRSLRAPQNLFLVSLAAADILVATLI 70

Human    66 IPFSLANELLGYWYFRRTWCEVYLALDVLFCTSSIVHLCAISLDRYWAVSRALEYNSKRTPRRIK 130
            |||||||||||||||.|.|||||||||||||||||||||||||||||||||||||||||||||||
  Rat    71 IPFSLANELLGYWYFWRAWCEVYLALDVLFCTSSIVHLCAISLDRYWAVSRALEYNSKRTPRRIK 135

Human   131 CIILTVWLIAAVISLPPLIYKGDQGPQPRGRPQCKLNQEAWYILASSIGSFFAPCLIMILVYLRI 195
            ||||||||||||||||||||||||.|:|||.|||:||||||||||||||||||||||||||||||
  Rat   136 CIILTVWLIAAVISLPPLIYKGDQRPEPRGLPQCELNQEAWYILASSIGSFFAPCLIMILVYLRI 200

Human   196 YLIAKRSNRRGPRAKGGPGQGESKQPRPDHGGALASAKLPALAS-VASAREVNGHSKSTGEKEEG 259
            |:|||||:.||..||.|.|:||||:|:|..||...|||:|.|.| ::|..|.|||.|...|||||
  Rat   201 YVIAKRSHCRGLGAKRGSGEGESKKPQPVAGGVPTSAKVPTLVSPLSSVGEANGHPKPPREKEEG 265

Human   260 ETPEDTGTRALPPSWAALPNSGQGQKEGVCGASPEDEAEEEEEEEEEEEECEPQAVPVSPASACS 324
            |||||...|||||:|:|||.||||||:|..||:.|   |.:||:|||.||||||.:|.||||.|:
  Rat   266 ETPEDPEARALPPTWSALPRSGQGQKKGTSGATAE---EGDEEDEEEVEECEPQTLPASPASVCN 327

Human   325 PPLQQPQGSRVLATLRGQVLLGRGVGAIGGQWWRRRAQLTREKRFTFVLAVVIGVFVLCWFPFFF 389
            |||||||.||||||||||||||:.||...|||||||.||:|||||||||||||||||:|||||||
  Rat   328 PPLQQPQTSRVLATLRGQVLLGKNVGVASGQWWRRRTQLSREKRFTFVLAVVIGVFVVCWFPFFF 392

Human   390 SYSLGAICPKHCKVPHGLFQFFFWIGYCNSSLNPVIYTIFNQDFRRAFRRILCRPWTQTAW 450
            |||||||||:||||||||||||||||||||||||||||:||||||||||||||||||||.|
  Rat   393 SYSLGAICPQHCKVPHGLFQFFFWIGYCNSSLNPVIYTVFNQDFRRAFRRILCRPWTQTGW 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ADRA2BNP_000673.2 7tmA_alpha2B_AR 7..437 CDD:320444 361/430 (84%)
TM helix 1 14..40 CDD:320444 24/25 (96%)
TM helix 2 47..73 CDD:320444 25/25 (100%)
TM helix 3 85..115 CDD:320444 29/29 (100%)
TM helix 4 127..150 CDD:320444 22/22 (100%)
TM helix 5 169..198 CDD:320444 28/28 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 204..229 14/24 (58%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 241..329 56/87 (64%)
TM helix 6 364..394 CDD:320444 27/29 (93%)
TM helix 7 405..430 CDD:320444 23/24 (96%)
Adra2bNP_612514.2 7tm_4 26..>157 CDD:304433 128/130 (98%)
7tm_1 34..429 CDD:278431 330/397 (83%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 213..331 73/120 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C83678335
Domainoid 1 1.000 671 1.000 Domainoid score I3859
eggNOG 1 0.900 - - E33208_3BC1G
HGNC 1 1.500 - -
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H553
Inparanoid 1 1.050 773 1.000 Inparanoid score I7847
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG43153
OrthoDB 1 1.010 - - D106320at9347
OrthoFinder 1 1.000 - - FOG0001303
OrthoInspector 1 1.000 - - oto142602
orthoMCL 1 0.900 - - OOG6_112777
Panther 1 1.100 - - LDO PTHR24248
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X801
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1717.310

Return to query results.
Submit another query.