DRSC/TRiP Functional Genomics Resources

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Protein Alignment H3c14 and cid

DIOPT Version :9

Sequence 1:NP_835734.2 Gene:H3c14 / 15077 MGIID:2448355 Length:136 Species:Mus musculus
Sequence 2:NP_523730.2 Gene:cid / 36495 FlyBaseID:FBgn0040477 Length:225 Species:Drosophila melanogaster


Alignment Length:148 Identity:48/148 - (32%)
Similarity:67/148 - (45%) Gaps:29/148 - (19%)


- Green bases have known domain annotations that are detailed below.


Mouse     3 RTKQTARKSTGGKAPRKQLATKAA-----------RKSAPATGGVKKPHRYRPGTVALREIRRYQ 56
            |:.||.|.:.     :::..|:||           ||:|......|:..         |||||.|
  Fly    91 RSPQTRRMTV-----QQESKTRAAGPVAAQNQTRRRKAANPMSRAKRMD---------REIRRLQ 141

Mouse    57 KSTELLIRKLPFQRLVREIAQDFKTD--LRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVT 119
            .....||.||||.|||||....:..|  ||....|::|:||:.|.||.....|:.:...|..|||
  Fly   142 HHPGTLIPKLPFSRLVREFIVKYSDDEPLRVTEGALLAMQESCEMYLTQRLADSYMLTKHRNRVT 206

Mouse   120 IMPKDIQLARRI--RGER 135
            :..:|:.|...|  ||.:
  Fly   207 LEVRDMALMAYICDRGRQ 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H3c14NP_835734.2 PTZ00018 1..136 CDD:185400 48/148 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..43 11/50 (22%)
cidNP_523730.2 H4 135..219 CDD:419976 34/83 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1745
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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