DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ADRA2A and Oamb

DIOPT Version :9

Sequence 1:NP_000672.3 Gene:ADRA2A / 150 HGNCID:281 Length:465 Species:Homo sapiens
Sequence 2:NP_001262774.1 Gene:Oamb / 43982 FlyBaseID:FBgn0024944 Length:751 Species:Drosophila melanogaster


Alignment Length:582 Identity:160/582 - (27%)
Similarity:233/582 - (40%) Gaps:187/582 - (32%)


- Green bases have known domain annotations that are detailed below.


Human    51 LVCLAGL--LMLLTVFGNVLVIIAVFTSRALKAPQNLFLVSLASADILVATLVIPFSLANEVMGY 113
            |:.||.|  :.:|.:.||.|||.|||.|..|::..|.|:|:||.||:||...|:|||...||...
  Fly    21 LISLAVLEFINVLVIGGNCLVIAAVFCSNKLRSVTNFFIVNLAVADLLVGLAVLPFSATWEVFKV 85

Human   114 WYFGKAWCEIYLALDVLFCTSSIVHLCAISLDRYWSITQAIEYNLKRTPRRIKAIIITVWVISAV 178
            |.||..||.|:||:||..||:||::|||||||||.::|:.:.|....:.::.|::|..:||:|..
  Fly    86 WIFGDLWCRIWLAVDVWMCTASILNLCAISLDRYVAVTRPVTYPSIMSTKKAKSLIAGIWVLSFF 150

Human   179 ISFPPLI-------------------------------------SIEKK------------GGGG 194
            |.||||:                                     ||:.:            |.|.
  Fly   151 ICFPPLVGWKDQKAVIQPTYPKGNHTLYYTTTMSSSEDGQLGLDSIKDQGEASLPPSPPHIGNGN 215

Human   195 GPQPAEP---------------------------------------------------------- 201
            ...|.:|                                                          
  Fly   216 AYNPYDPGFAPIDGSAEIRIAAIDSTSTSTTATTTTTASSSSTTETEMDLDLLNAPPQNRPQTIS 280

Human   202 -----RCEINDQKWYVISSCIGSFFAPCLIMILVYVRIYQIAKRRTRVPPSRRGPDAVAAPPG-G 260
                 :||:.:.:.||:.|.:|||:.|..:|:..|.|||:.|.|.||.  ..:|........| |
  Fly   281 GSCPWKCELTNDRGYVLYSALGSFYIPMFVMLFFYWRIYRAAVRTTRA--INQGFKTTKGSKGIG 343

Human   261 TERRPNGLGPERSAGPGGAEAEPLPTQLNGAP-------GEPAP--------------------- 297
            :......|......|.|..:.:.:.:  ||:.       |.|:|                     
  Fly   344 SRFEEQRLTLRIHRGRGSNQQDSMHS--NGSTQSTTTTLGTPSPERLSKYATRRLHHHDKIKISV 406

Human   298 AGPRDTDALDLEESSSSDHAERPPGPRR---PERGPRGK--------------GKARASQVKPGD 345
            :.|...:..:|.......|..|..|...   ...|..|:              |.|.:..::.|.
  Fly   407 SYPSSENISELAGHGDVGHERRQSGNALFAVHYNGTNGRESTESQLYRQQQQHGVASSCYLQVGK 471

Human   346 SLP---RRGPGATGIGTPAAGPGEERVGAAKASRWRGRQN---REKRFTF------VLAVVIGVF 398
            .||   ||....    :.|.|.|..|    .|::..||:|   :.|||..      .||:::|:|
  Fly   472 GLPELARRQSNT----SEAGGSGHSR----PANKKMGRRNIKAQVKRFRMETKAAKTLAIIVGMF 528

Human   399 VVCWFPFFFTYTLTAVGCS--VPRTLFKFFFWFGYCNSSLNPVIYTIFNHDFRRAFKKILCR 458
            :.||.|||..|.:... |.  |...||...||.|||||::||:||.:|:.|||.|||:|:||
  Fly   529 IFCWCPFFTMYIIRPF-CQDCVDPLLFSVLFWLGYCNSAVNPMIYALFSKDFRFAFKRIICR 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ADRA2ANP_000672.3 7tmA_alpha2A_AR 49..452 CDD:320445 154/574 (27%)
TM helix 1 51..75 CDD:320445 12/25 (48%)
TM helix 2 84..106 CDD:320445 12/21 (57%)
TM helix 3 122..144 CDD:320445 13/21 (62%)
TM helix 4 167..183 CDD:320445 6/15 (40%)
TM helix 5 209..232 CDD:320445 8/22 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 242..368 30/174 (17%)
PHA03307 244..>389 CDD:223039 36/196 (18%)
TM helix 6 388..410 CDD:320445 9/27 (33%)
TM helix 7 420..445 CDD:320445 13/24 (54%)
OambNP_001262774.1 7tm_4 29..>154 CDD:304433 57/124 (46%)
7tm_1 37..>181 CDD:278431 60/143 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
21.870

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