DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gzmf and CG18420

DIOPT Version :9

Sequence 1:NP_034504.1 Gene:Gzmf / 14943 MGIID:109254 Length:248 Species:Mus musculus
Sequence 2:NP_995715.1 Gene:CG18420 / 2768924 FlyBaseID:FBgn0028866 Length:299 Species:Drosophila melanogaster


Alignment Length:276 Identity:85/276 - (30%)
Similarity:125/276 - (45%) Gaps:50/276 - (18%)


- Green bases have known domain annotations that are detailed below.


Mouse     1 MPPILILLTL--LL--------------PLRAGAEEIIGGHEVKPHSRPYMARVRFVKDNGKRHS 49
            |..||:|||:  ||              ||:.| ..|:.|.....:|.|:||   |:..:..:..
  Fly     8 MASILLLLTVFPLLGSTQFLDSECGTRSPLKLG-PRIVNGKVAVRNSSPWMA---FLHTSSNQFI 68

Mouse    50 CGGFLVQDYFVLTAAHC--TGSSMRVILGAHNIRAK---EETQQIIPVAKAIPHPAYDDKDNTSD 109
            |||.|:....|||||||  ..:::.|.||.:|.:.|   ||.|    |.:...|..||...:.:|
  Fly    69 CGGTLISRRLVLTAAHCFIPNTTIVVRLGEYNRKLKGYREEHQ----VNRTFQHRFYDPNTHAND 129

Mouse   110 IMLLKLESKAKRTKAVRPLKLPRPNARVKPGHVCSV-----AGWGRTSINATQRSSCLREAQLII 169
            |.||:|.|.......:||:.: ..:|..| .|:.|:     .|||||  .:...||.||...:..
  Fly   130 IALLRLVSNVVYKANIRPICI-MWDASWK-HHIDSIKVLTGTGWGRT--ESMHDSSELRTLDISR 190

Mouse   170 QKDKECKKYFYKYFKTMQICAGDPKKIQSTYSGDSGGP---LVCNNKAYGVLTYGL----NRTIG 227
            |..|.|.   :....:.|.|||:..  .:...||:|||   :|....|:..:..|:    .|...
  Fly   191 QPSKMCA---FGSVLSNQFCAGNWN--SNLCIGDTGGPVGAMVRYRNAFRFVQVGIAITNKRCQR 250

Mouse   228 PGVFTKVVHYLPWISR 243
            |.|||.|:.::.:|.|
  Fly   251 PSVFTDVMSHIEFIRR 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GzmfNP_034504.1 Tryp_SPc 20..241 CDD:214473 72/237 (30%)
Tryp_SPc 21..244 CDD:238113 74/240 (31%)
CG18420NP_995715.1 Tryp_SPc 42..264 CDD:214473 72/237 (30%)
Tryp_SPc 43..267 CDD:238113 74/240 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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