DRSC/TRiP Functional Genomics Resources

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Protein Alignment GLIS1 and ztf-14

DIOPT Version :10

Sequence 1:NP_001377765.1 Gene:GLIS1 / 148979 HGNCID:29525 Length:803 Species:Homo sapiens
Sequence 2:NP_001360586.1 Gene:ztf-14 / 187492 WormBaseID:WBGene00010936 Length:483 Species:Caenorhabditis elegans


Alignment Length:627 Identity:153/627 - (24%)
Similarity:225/627 - (35%) Gaps:248/627 - (39%)


- Green bases have known domain annotations that are detailed below.


Human   138 LLHF--PHPDRSPRPQATYVN--GSLPTTQHIKQESLPDYQAMAEA----RTSLSAHCRGPLATG 194
            |||.  |:|:..   ..|:.|  .|.|        ||.:|.:|:.|    .|..::....|:.| 
 Worm    10 LLHVVPPYPNAL---DVTHQNSGNSSP--------SLHNYSSMSPASSVSNTVYNSSEVSPMGT- 62

Human   195 LHPDLDLPGRSLATPAPSCYLLGSEPSSGLGLQPETHLPEGSLKRCCVLGLPPTSPASSSPCASS 259
                    |.:....||:.:   ..|      :|:.|:         ||          :|..|.
 Worm    63 --------GDASWNKAPNYF---ERP------KPDRHI---------VL----------NPLGSP 91

Human   260 DVTSIIRSSQTSLVTCVNGLRSPPLTGDLGG----------------PSKRARPGPASTDSHEGS 308
            |:.:..:|..:|::..:|.|    :.|..||                |:.: ||..|:|.:..|:
 Worm    92 DIGAQFQSPASSIMNTINSL----VHGSSGGLLQVQQSQYFGPAELNPNLK-RPHDATTSTEFGA 151

Human   309 LQL---------------EACRKASFLKQEPADEFSELFGPHQQGLPPPYPLSQLPPGPSLGGLG 358
            |.:               :..|:.:..|:|..||..::..|.:|              |.|.   
 Worm   152 LSVVPIPFDCNQTTGGIEQTIREVATNKRERVDEELDVIIPKKQ--------------PRLS--- 199

Human   359 LGLAGRVVAGRQACRWVDCCAAYEQQEELVRHIEKSHIDQRKGEDF-TCFWAGCVRRYKPFNARY 422
                   |.|::..|....|.|        .:|..:.|.::..||. .|.|.||.   ...:.|.
 Worm   200 -------VNGKRIGRPPGSCKA--------NYIPPTKITEQNDEDVRQCLWDGCT---LTLDDRA 246

Human   423 KLLIHM-------------RVHSGEKPNKCMPFPQFFHEFEGCSKAFSRLENLKIHLRSHTGEKP 474
            ...:|:             |.|:.:|...|          |.|.|.:.||||||.|.|:||||||
 Worm   247 TFFVHVDNHIQKNEVNSHKRTHTKQKLYCC----------EVCPKRYGRLENLKTHRRTHTGEKP 301

Human   475 YLCQHPGCQKAFSNSSDRAKH-QRTHLDTKPYACQIPGCSKRYTDPSSLRKHVKA----HSAKEQ 534
            |.|..|.|.|:|:|:|||:|| :|||.:.|||.|....|:..||||||||||||:    |.|.:.
 Worm   302 YHCNVPNCNKSFTNASDRSKHSKRTHSNEKPYCCDFGSCACAYTDPSSLRKHVKSKHPEHHAMKM 366

Human   535 QVRKKLHAGPDTEADVLTECLVLQQLHTSTQLAASDGKGGCGLGQELLPGVYPGSITPHNGLASG 599
            .:||             |:...::|:                                       
 Worm   367 AMRK-------------TQRKSIKQI--------------------------------------- 379

Human   600 LLPPAHDVPSRHHPLDATTSSHHHLSPLPMAESTRDGLGPGLLSPIVSPLKGLGPPPL---PPSS 661
                              .|....:||||.|..          :|| ||.:.|...||   ||..
 Worm   380 ------------------ASEKVQMSPLPTAAE----------API-SPQQNLPTLPLNMIPPPL 415

Human   662 QSHSP-GGQPFPTLP-SKPSYPPF------QSPPPPPLPSPQ 695
            |:..| ...||..:| :.|:...|      .:||..|.|.||
 Worm   416 QTQLPLRVPPFTGMPFANPALQLFLATQMRMAPPMTPFPLPQ 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GLIS1NP_001377765.1 C2H2 Zn finger 376..395 CDD:275368 3/18 (17%)
C2H2 Zn finger 406..431 CDD:275368 7/37 (19%)
COG5048 447..>522 CDD:227381 42/75 (56%)
C2H2 Zn finger 450..469 CDD:275368 11/18 (61%)
C2H2 Zn finger 477..499 CDD:275368 12/22 (55%)
C2H2 Zn finger 507..529 CDD:275368 14/25 (56%)
ztf-14NP_001360586.1 zf-H2C2_2 260..283 CDD:463886 7/32 (22%)
zf-C2H2 274..296 CDD:395048 12/31 (39%)
C2H2 Zn finger 276..296 CDD:275368 12/29 (41%)
zf-H2C2_2 288..315 CDD:463886 17/26 (65%)
SFP1 <298..358 CDD:227516 36/59 (61%)
C2H2 Zn finger 304..327 CDD:275368 12/22 (55%)
C2H2 Zn finger 335..355 CDD:275368 12/19 (63%)

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