back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Gstt1 and GstE6

DIOPT Version :9

Sequence 1:	NP_032211.3	Gene:	Gstt1 / 14871	MGIID:	107379	Length:	240	Species:	Mus musculus
Sequence 2:	NP_611328.1	Gene:	GstE6 / 37111	FlyBaseID:	FBgn0063494	Length:	222	Species:	Drosophila melanogaster

Alignment Length:	204	Identity:	55/204 - (26%)
Similarity:	97/204 - (47%)	Gaps:	21/204 - (10%)

- Green bases have known domain annotations that are detailed below.

Mouse     3 LELY-LDLLSQPCRAIYIFAKKNNIPFQMHTVELRKGEHLSDAFARVNPMKRVPAMMDGGFTLCE 66
            |.|| || .|.|.||:.:.....|:.::...|::.....||..:...||...||.:.|.|..:.:
  Fly     4 LTLYGLD-PSPPVRAVKLTLAALNLTYEYVNVDIVARAQLSPEYLEKNPQHTVPTLEDDGHYIWD 67

Mouse    67 SVAILLYLAHKYKVPDHWYPQDLQARARVDEYLAWQHTGLRRSCLRALWHKVMFPVFLGE-QIPP 130
            |.||:.||..||...|..||:|...||.||:.|.::...:..:.:|::...|:|.   |: ::|.
  Fly    68 SHAIIAYLVSKYADSDALYPKDPLKRAVVDQRLHFESGVVFANGIRSISKSVLFQ---GQTKVPK 129

Mouse   131 ETLAATLAELDVNLQVLEDKFLQDKDFLVGPHISLADLVAITELMHPVGGGCPVFEG-----HPR 190
            |...|.:...|     ..:.||:.:|::.|..:::||...::.:     .....|..     :||
  Fly   130 ERYDAIIEIYD-----FVETFLKGQDYIAGNQLTIADFSLVSSV-----ASLEAFVALDTTKYPR 184

Mouse   191 LAAWYQRVE 199
            :.||.:::|
  Fly   185 IGAWIKKLE 193

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.