Sequence 1: | NP_666178.2 | Gene: | Gspt1 / 14852 | MGIID: | 1316728 | Length: | 636 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001260415.1 | Gene: | eRF3 / 34658 | FlyBaseID: | FBgn0020443 | Length: | 619 | Species: | Drosophila melanogaster |
Alignment Length: | 636 | Identity: | 377/636 - (59%) |
---|---|---|---|
Similarity: | 449/636 - (70%) | Gaps: | 78/636 - (12%) |
- Green bases have known domain annotations that are detailed below.
Mouse 56 AQREN--LSAAFSRQLNVNAKPFVPN------VHAAEFVPSFL-----------RGPAQPPLSPA 101
Mouse 102 ------GAAGGDHGA--------GSGAGGPS--EPVESSQDQS-CEGSNST---VSMELSEPV-- 144
Mouse 145 --------VENGETEMSPEESWE--------HKEEISEAEPGGGSSGDGRPPEESTQEMMEEEEE 193
Mouse 194 IPKPKSAVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETW 258
Mouse 259 YLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISAR 323
Mouse 324 KGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYEECKEKLVPFLKKVGFN 388
Mouse 389 PKKDIHFMPCSGLTGANLKEQ--SDFCPWYIGLPFIPYLDNLPNFNRSVDGPIRLPIVDKYKDMG 451
Mouse 452 TVVLGKLESGSICKGQQLVMMPNKHNVEVLGILSDDVETDSVAPGENLKIRLKGIEEEEILPGFI 516
Mouse 517 LCDLNNLCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRP 581
Mouse 582 RFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLV 632 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Gspt1 | NP_666178.2 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..54 | ||
PAM2 | 64..81 | CDD:284542 | 10/22 (45%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 90..206 | 37/164 (23%) | |||
TEF1 | 209..633 | CDD:227581 | 322/426 (76%) | ||
EF1_alpha | 213..429 | CDD:206670 | 178/217 (82%) | ||
G1. /evidence=ECO:0000255|PROSITE-ProRule:PRU01059 | 218..225 | 6/6 (100%) | |||
G2. /evidence=ECO:0000255|PROSITE-ProRule:PRU01059 | 274..278 | 3/3 (100%) | |||
G3. /evidence=ECO:0000255|PROSITE-ProRule:PRU01059 | 295..298 | 2/2 (100%) | |||
G4. /evidence=ECO:0000255|PROSITE-ProRule:PRU01059 | 357..360 | 2/2 (100%) | |||
G5. /evidence=ECO:0000255|PROSITE-ProRule:PRU01059 | 399..401 | 1/1 (100%) | |||
eRF3_II | 438..519 | CDD:293906 | 51/80 (64%) | ||
eRF3_C_III | 525..631 | CDD:294003 | 79/105 (75%) | ||
eRF3 | NP_001260415.1 | PAM2 | 12..28 | CDD:284542 | 10/16 (63%) |
TEF1 | 191..619 | CDD:227581 | 323/428 (75%) | ||
EF1_alpha | 197..416 | CDD:206670 | 179/218 (82%) | ||
eRF3_II | 424..505 | CDD:293906 | 51/80 (64%) | ||
eRF3_C_III | 511..617 | CDD:294003 | 79/105 (75%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 365 | 1.000 | Domainoid score | I930 |
eggNOG | 1 | 0.900 | - | - | E1_COG5256 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H68226 | |
Inparanoid | 1 | 1.050 | 691 | 1.000 | Inparanoid score | I687 |
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S365 |
OMA | 1 | 1.010 | - | - | QHG54149 | |
OrthoDB | 1 | 1.010 | - | - | D1150082at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002347 | |
OrthoInspector | 1 | 1.000 | - | - | otm42717 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101550 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR23115 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R2104 |
SonicParanoid | 1 | 1.000 | - | - | X149 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
16 | 15.820 |