DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gsx2 and Antp

DIOPT Version :9

Sequence 1:NP_573555.1 Gene:Gsx2 / 14843 MGIID:95843 Length:305 Species:Mus musculus
Sequence 2:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster


Alignment Length:262 Identity:77/262 - (29%)
Similarity:94/262 - (35%) Gaps:99/262 - (37%)


- Green bases have known domain annotations that are detailed below.


Mouse    88 AAVAGGGVAGGTGALPLLKSQFSPAPGDAQFCPRVSHAHHHHHPPQ---------------HHHH 137
            |||.|.|:....|:.||: .|.|....:||    ::..||..||..               |.:|
  Fly   166 AAVGGLGMVPEGGSPPLV-DQMSGHHMNAQ----MTLPHHMGHPQAQLGYTDVGVPDVTEVHQNH 225

Mouse   138 HHQ---PQQPGSAAAAAAAAA----AAAAAAAALGHPQHHAPVCAATTYNMSDPRRFHCLSMGGS 195
            |:.   .||.|.....|....    .........|||..|.|                       
  Fly   226 HNMGMYQQQSGVPPVGAPPQGMMHQGQGPPQMHQGHPGQHTP----------------------- 267

Mouse   196 DTSQVPNG-----------------------KRMRTAFTSTQLLELEREFSSNMYLSRLRRIEIA 237
             .||.||.                       ||.|..:|..|.||||:||..|.||:|.||||||
  Fly   268 -PSQNPNSQSSGMPSPLYPWMRSQFGKCQERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIA 331

Mouse   238 TYLNLSEKQVKIWFQNRRVKHKKEGKGASRNNHTSCKCVGSQAHYARSEDEDSLSPASANEDKEI 302
            ..|.|:|:|:||||||||:|.|||.|                   .:.|      |.|..|..||
  Fly   332 HALCLTERQIKIWFQNRRMKWKKENK-------------------TKGE------PGSGGEGDEI 371

Mouse   303 SP 304
            :|
  Fly   372 TP 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gsx2NP_573555.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 115..151 12/53 (23%)
Homeobox 207..259 CDD:278475 32/51 (63%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 259..305 11/46 (24%)
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 35/168 (21%)
Homeobox 301..354 CDD:395001 32/52 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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