DRSC/TRiP Functional Genomics Resources

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Protein Alignment SAMD11 and gmeb-1

DIOPT Version :10

Sequence 1:NP_001372569.1 Gene:SAMD11 / 148398 HGNCID:28706 Length:845 Species:Homo sapiens
Sequence 2:NP_493634.4 Gene:gmeb-1 / 182061 WormBaseID:WBGene00015285 Length:374 Species:Caenorhabditis elegans


Alignment Length:54 Identity:12/54 - (22%)
Similarity:24/54 - (44%) Gaps:11/54 - (20%)


- Green bases have known domain annotations that are detailed below.


Human    19 GAVKDTTEDSITEDDKRRNY-------GGVYV----GLPSEAVNMASSQTKTVQ 61
            |..||..|.:..:...|:.:       ||:.:    |:.|...:..||:.::|:
 Worm   173 GKAKDGVEPTFVKPHDRKAFELSKLVWGGIRMALASGMKSNEKSKKSSKFESVK 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SAMD11NP_001372569.1 SAND 110..185 CDD:460167
SAM_Samd7,11 704..771 CDD:188978
gmeb-1NP_493634.4 SAND 66..143 CDD:460167
Blue background indicates that the domain is not in the aligned region.

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