Sequence 1: | NP_001359487.1 | Gene: | Grin1 / 14810 | MGIID: | 95819 | Length: | 959 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_727328.1 | Gene: | Ir8a / 31867 | FlyBaseID: | FBgn0052704 | Length: | 936 | Species: | Drosophila melanogaster |
Alignment Length: | 897 | Identity: | 190/897 - (21%) |
---|---|---|---|
Similarity: | 338/897 - (37%) | Gaps: | 258/897 - (28%) |
- Green bases have known domain annotations that are detailed below.
Mouse 223 KNVTALLMEARDLEARVIILSASED--------DAATVYRAAAMLNMT--------------GSG 265
Mouse 266 YVWLVGER------EISGNALRYAPDGIIGLQLINGKNESAHISDAVGVVAQAV-----HELLEK 319
Mouse 320 ENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYADGVTGRVE--------------FNEDGDRKFA 370
Mouse 371 NY-----------------------------SIMNLQNRKLVQV--GIYNGTHVIP-------ND 397
Mouse 398 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFV-YVKP-------------------TMSDGTCK 442
Mouse 443 EEFTVNGD------------------PVKKVICTGPNDTSPGS-------------PRHTVPQCC 476
Mouse 477 YGFCVDLLIKLARTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTIN 541
Mouse 542 NERAQYIEFSKPFKYQ-GLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFS 605
Mouse 606 PFGRFKVNSEEEEEDA-------LTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMI 663
Mouse 664 IVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYF-RRQVELSTMYRHM 727
Mouse 728 E--------------------KHNYESAAEAI---QAVRD------------NKLHAFIWDSAVL 757
Mouse 758 EFEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLSILKSHENGFMEDLD-KTWVRYQECDS 821
Mouse 822 RSNAP--------ATLTFENMAGVFMLVAGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAV-- 876
Mouse 877 -----------------------NVWRKNL--QDRKSGRAEPDPK-KKATFR 902 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Grin1 | NP_001359487.1 | PBP1_iGluR_NMDA_NR1 | 25..404 | CDD:380602 | 44/265 (17%) |
PBP2_iGluR_NMDA_Nr1 | 416..820 | CDD:270437 | 120/499 (24%) | ||
Ion_trans_2 | <622..677 | CDD:369572 | 21/54 (39%) | ||
CaM_bdg_C0 | 856..884 | CDD:371136 | 6/54 (11%) | ||
Ir8a | NP_727328.1 | PBP2_iGluR_putative | 383..786 | CDD:270435 | 109/425 (26%) |
Lig_chan | 520..818 | CDD:278489 | 80/314 (25%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000021 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |