Sequence 1: | XP_030098003.1 | Gene: | Grik5 / 14809 | MGIID: | 95818 | Length: | 1003 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_730940.1 | Gene: | Nmdar1 / 40665 | FlyBaseID: | FBgn0010399 | Length: | 997 | Species: | Drosophila melanogaster |
Alignment Length: | 1061 | Identity: | 258/1061 - (24%) |
---|---|---|---|
Similarity: | 430/1061 - (40%) | Gaps: | 229/1061 - (21%) |
- Green bases have known domain annotations that are detailed below.
Mouse 51 INGII-EVPAKARVEVDIFELQRDSQY-------------------ETTDTMC-QILPKGVVSVL 94
Mouse 95 ---GPSSSPASASTVSHICGEKEIPHIKVGPEETP------RLQYLRFASVSLYPSNEDVSLAVS 150
Mouse 151 RILKSFNYPSASLICAKAECLLRLEELVRGFLISKETLSVRMLD--DSRDPTPLLKEIRDDKVST 213
Mouse 214 I---IIDANASISHLVLRLSLNLSSPLGFPRSLPLGLSCVLQASELGMTSAFYKYILTTMDFPIL 275
Mouse 276 HLDGIVEDSSNILGFSMFNTSHPFYPEFVRSLNMSWRENCEASTYPGPALSAALMFDAVHVVVSA 340
Mouse 341 VRELNRSQEIGVKPLAC-TSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSKGQR--TNYTLRILE 402
Mouse 403 KSRQGHREIGVW-YSNRTLAMNATTLDINLSQ-------------TLANKTLVVTTILENPYVM- 452
Mouse 453 -------------RRP-----NFQALSGNERFEGFCVDMLRELAELLRFRYRLRLVEDGLY---- 495
Mouse 496 -----GAPEPNGSWTGMVGELINRQKADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHMGR 555
Mouse 556 KPGYFSFLDPFSPAVWLFMLLAYLAVSCVLFLAARLSPYEWYNPHPCLRARPHILENQYTLGNSL 620
Mouse 621 WFPVGGFMQQG-SEIMPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDLA- 683
Mouse 684 --DQTNIEYGTIHAGSTMTFFQ-----NSRYQTYQRMWNYMQSKQPSVFVKSTEEGIARVLNSRY 741
Mouse 742 AFLLESTMNEYHRRLNCNLTQIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQENNRLEILKRKW 806
Mouse 807 WEGGRCPKE---EDHRAKGLGMENIGGIFVVLICGLIIAVFVAVMEFIWSTRRSAESEEVSVCQE 868
Mouse 869 MLQELRHAVSCRKTSRS----RRRRRPG-----GPSRALLSLRAVREMRLSNGKLYSAGAGGDAG 924
Mouse 925 AHGGPQRL----------------LDDPGPPGGPRPQAPTPCTHVRVCQECRRIQALRASGAGAP 973
Mouse 974 PRGLGTPAEATSPPRPRPGPT 994 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Grik5 | XP_030098003.1 | PBP1_iGluR_Kainate_KA1_2 | 23..424 | CDD:380616 | 83/411 (20%) |
Periplasmic_Binding_Protein_Type_2 | 437..808 | CDD:419667 | 130/407 (32%) | ||
Nmdar1 | NP_730940.1 | PBP1_iGluR_NMDA_NR1 | 12..405 | CDD:107374 | 86/425 (20%) |
ANF_receptor | 58..371 | CDD:279440 | 77/370 (21%) | ||
PBP2_iGluR_NMDA_Nr1 | 417..818 | CDD:270437 | 131/416 (31%) | ||
HisJ | 451..>558 | CDD:223904 | 41/108 (38%) | ||
Periplasmic_Binding_Protein_Type_2 | <516..651 | CDD:304360 | 49/140 (35%) | ||
Lig_chan | 575..838 | CDD:278489 | 80/276 (29%) | ||
CaM_bdg_C0 | 854..882 | CDD:287524 | 2/27 (7%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000021 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |