Sequence 1: | XP_030098003.1 | Gene: | Grik5 / 14809 | MGIID: | 95818 | Length: | 1003 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_608557.4 | Gene: | GluRIIC / 33275 | FlyBaseID: | FBgn0046113 | Length: | 940 | Species: | Drosophila melanogaster |
Alignment Length: | 921 | Identity: | 260/921 - (28%) |
---|---|---|---|
Similarity: | 429/921 - (46%) | Gaps: | 128/921 - (13%) |
- Green bases have known domain annotations that are detailed below.
Mouse 73 DSQYETTDTMCQILPKGVVSVLGPSSSPASASTVSHICGEKEIPHIK--VGPE----ETPRLQYL 131
Mouse 132 RFASVSLYPSNEDVSLAVSRILKSFNYPSASLI--CAKAECLLRLEELVRGFLISKETLSVRMLD 194
Mouse 195 DSRDPTPLLKEIRDDKVSTIIIDANASISHLVLRLSLNLSSPLGFPRSLPLGLSCVLQASELGMT 259
Mouse 260 SAFYKYILTTMDFPILHLDGIVEDSS----NILGFSMF-NTSHPFYPEFVRSLNMSW---REN-C 315
Mouse 316 EASTYPGPALSAALMFDAVHVVVSAVRELNRS----QEIGVKPLAC----TSANIWPHGTSLMNY 372
Mouse 373 LRMVEYDGL------TGRVEFNSKGQRTNYTLRILEK-SRQGHREIGVWYSNRTLAMNATTLDIN 430
Mouse 431 LSQTLANKTLV--VTTILENPY-----VMRRPNFQALSGNERFEGFCVDMLRELAELLRFRYRLR 488
Mouse 489 LVEDGLYG-APEPNGSWTGMVGELINRQKADLAVAAFTITAEREKVIDFSKPFMTLGISIL-YR- 550
Mouse 551 VHMGRKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLFLAARLSPYEWYNPHPCLRARPHILENQYT 615
Mouse 616 LGNSLWFPVGGFMQQGSEIMPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESAD 680
Mouse 681 DLADQTNIEYGTIHAGSTMTFFQNSRYQTYQRMWNYMQSKQPSVFVKSTEEGIARVLNSR--YAF 743
Mouse 744 LLESTMNEYHRRLNCNLTQIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQENNRLEILKRKWWE 808
Mouse 809 --GGRCPKEEDHRA-KGLGMENIGGIFVVLICGLIIAVFVAVMEFIWSTRRSAESEEVSVCQEML 870
Mouse 871 QELRHAV----------------SCRKTSR----SRRRRRPGGPSRALL--SLRAVREMRLSNGK 913
Mouse 914 LYSAGAGGDAG 924 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Grik5 | XP_030098003.1 | PBP1_iGluR_Kainate_KA1_2 | 23..424 | CDD:380616 | 82/382 (21%) |
Periplasmic_Binding_Protein_Type_2 | 437..808 | CDD:419667 | 141/382 (37%) | ||
GluRIIC | NP_608557.4 | PBP1_iGluR_Kainate | 26..404 | CDD:107377 | 82/374 (22%) |
Periplasmic_Binding_Protein_Type_1 | <279..363 | CDD:299141 | 20/92 (22%) | ||
PBP2_iGluR_Kainate | 423..794 | CDD:270432 | 140/377 (37%) | ||
Lig_chan | 554..828 | CDD:278489 | 105/274 (38%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167846286 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG60082 | |
OrthoDB | 1 | 1.010 | - | - | D60688at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000021 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.860 |