DRSC/TRiP Functional Genomics Resources

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Protein Alignment ZNRF4 and C18B12.4

DIOPT Version :9

Sequence 1:NP_859061.3 Gene:ZNRF4 / 148066 HGNCID:17726 Length:429 Species:Homo sapiens
Sequence 2:NP_510498.1 Gene:C18B12.4 / 181600 WormBaseID:WBGene00007666 Length:456 Species:Caenorhabditis elegans


Alignment Length:367 Identity:90/367 - (24%)
Similarity:149/367 - (40%) Gaps:73/367 - (19%)


- Green bases have known domain annotations that are detailed below.


Human    75 RPGRALVAVKALLVL-SLLQVPAQAVV---------------RAVLEDNSSSVDFADLPALFGVP 123
            :.||.:|....|||| .:.|..||.||               :.:.:..:..:|.:|.       
 Worm     3 KKGRNVVQSVGLLVLFGIYQCNAQYVVDVMRMTSFGEEELVHKCLAKGGNFGMDVSDF------- 60

Human   124 LAPEGIRGYLMEVKPANACHPIE-APRLGNRSLGAIVLIRR----YDCTFDLKVLNAQRA--GFE 181
            :..|...|..:.|:|.:||.|:. |.....|.......:.|    :.|.|..:....|.:  .|.
 Worm    61 IISEENLGCGVGVEPVDACGPVRIAQNHTTRCHNLFAFVSRSNISHPCKFSHQAFMVQNSTYPFR 125

Human   182 AAIVHNVHSDDLVSMTHVYEDLRGQIAIPSVFVSEAASQDLRVILGCNKSAHALLLPDDPPCHDL 246
            ..|.:|....:.:||...  :||.::.||.:.:|.|..:::..... :.:.:.|.:..||..::|
 Worm   126 LVIFYNYPGQEPISMEGT--ELRDKVNIPVLMISHACKEEIAKKFS-DTAGYRLRVRIDPGYYEL 187

Human   247 GCH--PVLTVSWVLGCTLALVVSAFFVLNHLWLWAQACCSHR----RPVKTSTCQKAQVRTFTWH 305
            ..:  |.|.|  ::.|         |.|..:.|..:.|...|    |.:.....:|..|:.:...
 Worm   188 FRYLIPFLVV--IVFC---------FALFLITLCVRGCVERRKLNKRRLSKRNLKKIPVKKYRLG 241

Human   306 N--DLCAICLDEYEEGDQLKILPCSHTYHCKCIDPWFSQAPRRSCPVCKQSVAATEDSFDSTT-- 366
            :  |.|||||:.:..|::|:.|||.|.:||.|||.|.:|. |:.||:||:.:....||..||.  
 Worm   242 DDPDTCAICLESFASGEKLRHLPCRHVFHCNCIDVWLTQT-RKICPLCKRKIGTDSDSECSTNDL 305

Human   367 -------------YSFRD-----EDPSLPGHRPPIWAIQVQL 390
                         |:..|     |.|...|....:|:.|..|
 Worm   306 ASTSQGPNDATALYNNADNQSGFELPVPQGQMVDLWSSQEAL 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZNRF4NP_859061.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 30..67
PA_C_RZF_like 86..244 CDD:239038 38/180 (21%)
zf-RING_2 307..352 CDD:290367 22/44 (50%)
C18B12.4NP_510498.1 PA <74..176 CDD:333703 21/104 (20%)
HRD1 <223..>335 CDD:227568 35/112 (31%)
RING-H2_RNF103 246..291 CDD:319387 23/45 (51%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 74 1.000 Domainoid score I6450
eggNOG 1 0.900 - - E1_KOG4628
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 142 1.000 Inparanoid score I3469
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm15079
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.820

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