DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ADRA1A and Adra1a

DIOPT Version :9

Sequence 1:NP_150646.3 Gene:ADRA1A / 148 HGNCID:277 Length:475 Species:Homo sapiens
Sequence 2:NP_058887.2 Gene:Adra1a / 29412 RGDID:2055 Length:466 Species:Rattus norvegicus


Alignment Length:434 Identity:400/434 - (92%)
Similarity:417/434 - (96%) Gaps:0/434 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MVFLSGNASDSSNCTQPPAPVNISKAILLGVILGGLILFGVLGNILVILSVACHRHLHSVTHYYI 65
            ||.||.|||:.||||.|||||||||||||||||||||:|||||||||||||||||||||||||||
  Rat     1 MVLLSENASEGSNCTHPPAPVNISKAILLGVILGGLIIFGVLGNILVILSVACHRHLHSVTHYYI 65

Human    66 VNLAVADLLLTSTVLPFSAIFEVLGYWAFGRVFCNIWAAVDVLCCTASIMGLCIISIDRYIGVSY 130
            ||||||||||||||||||||||:||||||||||||||||||||||||||||||||||||||||||
  Rat    66 VNLAVADLLLTSTVLPFSAIFEILGYWAFGRVFCNIWAAVDVLCCTASIMGLCIISIDRYIGVSY 130

Human   131 PLRYPTIVTQRRGLMALLCVWALSLVISIGPLFGWRQPAPEDETICQINEEPGYVLFSALGSFYL 195
            |||||||||||||:.||||||.||||||||||||||||||||||||||||||||||||||||||:
  Rat   131 PLRYPTIVTQRRGVRALLCVWVLSLVISIGPLFGWRQPAPEDETICQINEEPGYVLFSALGSFYV 195

Human   196 PLAIILVMYCRVYVVAKRESRGLKSGLKTDKSDSEQVTLRIHRKNAPAGGSGMASAKTKTHFSVR 260
            |||||||||||||||||||||||||||||||||||||||||||||.||.|.|::|||.|||||||
  Rat   196 PLAIILVMYCRVYVVAKRESRGLKSGLKTDKSDSEQVTLRIHRKNVPAEGGGVSSAKNKTHFSVR 260

Human   261 LLKFSREKKAAKTLGIVVGCFVLCWLPFFLVMPIGSFFPDFKPSETVFKIVFWLGYLNSCINPII 325
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   261 LLKFSREKKAAKTLGIVVGCFVLCWLPFFLVMPIGSFFPDFKPSETVFKIVFWLGYLNSCINPII 325

Human   326 YPCSSQEFKKAFQNVLRIQCLCRKQSSKHALGYTLHPPSQAVEGQHKDMVRIPVGSRETFYRISK 390
            |||||||||||||||||||||.|:|||||||||||||||||:||||:|||||||||.||||:|||
  Rat   326 YPCSSQEFKKAFQNVLRIQCLRRRQSSKHALGYTLHPPSQALEGQHRDMVRIPVGSGETFYKISK 390

Human   391 TDGVCEWKFFSSMPRGSARITVSKDQSSCTTARTKSRSVTRLEC 434
            ||||||||||||||:|||||||.||||:|||||.:|:|..::.|
  Rat   391 TDGVCEWKFFSSMPQGSARITVPKDQSACTTARVRSKSFLQVCC 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ADRA1ANP_150646.3 7tm_4 37..341 CDD:304433 291/303 (96%)
7tm_1 43..326 CDD:278431 271/282 (96%)
Nuclear localization signal 334..349 13/14 (93%)
Adra1aNP_058887.2 7tmA_alpha1A_AR 27..337 CDD:320448 297/309 (96%)
TM helix 1 29..53 CDD:320448 22/23 (96%)
TM helix 2 62..84 CDD:320448 21/21 (100%)
TM helix 3 100..122 CDD:320448 21/21 (100%)
TM helix 4 145..161 CDD:320448 13/15 (87%)
TM helix 5 182..205 CDD:320448 21/22 (95%)
TM helix 6 271..293 CDD:320448 21/21 (100%)
TM helix 7 305..330 CDD:320448 24/24 (100%)
Nuclear localization signal. /evidence=ECO:0000250 334..349 13/14 (93%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C83689169
Domainoid 1 1.000 562 1.000 Domainoid score I5559
eggNOG 1 0.900 - - E33208_3BB8F
HGNC 1 1.500 - -
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H68078
Inparanoid 1 1.050 887 1.000 Inparanoid score I6566
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG43807
OrthoDB 1 1.010 - - D1095345at2759
OrthoFinder 1 1.000 - - FOG0001183
OrthoInspector 1 1.000 - - oto133698
orthoMCL 1 0.900 - - OOG6_110474
Panther 1 1.100 - - LDO PTHR24248
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X580
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1818.270

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