Sequence 1: | NP_001106796.1 | Gene: | Gria1 / 14799 | MGIID: | 95808 | Length: | 907 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001138176.1 | Gene: | Ir7e / 7354417 | FlyBaseID: | FBgn0259189 | Length: | 608 | Species: | Drosophila melanogaster |
Alignment Length: | 858 | Identity: | 125/858 - (14%) |
---|---|---|---|
Similarity: | 242/858 - (28%) | Gaps: | 391/858 - (45%) |
- Green bases have known domain annotations that are detailed below.
Mouse 61 IVNISDSFEMTY-----RFCSQFSKGVYAIF---GFYERRTVNMLTSFCGALHVCFITPSFPVDT 117
Mouse 118 SNQFVL----------QLRPELQEALISIIDHYKWQTFVYIYDADRGLSVLQRVLDTAAEKNWQV 172
Mouse 173 TAVNILTTTEEGYRMLFQDLEKKKERLVVVDCESERLNAILGQIVKLEKNGIGYHYILANLGFMD 237
Mouse 238 ID---LNKFKESGANVTGFQLVNYTDTIPARIMQ---------QWRT-------SDARDHTRVDW 283
Mouse 284 -----------KRPKYTSALTYDGVKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDI 337
Mouse 338 QRALQQVRFEGLTGNVQFNEKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNS 402
Mouse 403 SVQNRTYIVTTILEDPYVMLKKNANQFEGNDRYEGYCVELAA-EIAKHVGYSYRLEIVSDGKYGA 466
Mouse 467 RDPDTKAWNGMVG--------ELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQK 523
Mouse 524 SKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIF 588
Mouse 589 NSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFL----------TVERM 643
Mouse 644 V--------SPI--ESAEDLAKQTEIAYGTLEAGSTKEFFRRSKIAVFEKMWTYMKSAEPSVFVR 698
Mouse 699 TTEEGMIRVRKSKGKYAYLLESTMNEYIE-QRKPCDTMKVGGNLDSKGYGIATP----------- 751
Mouse 752 --KGSALRGPVNLAVLKLSEQGVLDKLKSKWWYDKGECGSKDSGSKDKTSALSLSNVAGVFYILI 814
Mouse 815 GGLGLAMLVALIE 827 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Gria1 | NP_001106796.1 | PBP1_iGluR_AMPA_GluR1 | 26..389 | CDD:107385 | 56/375 (15%) |
ANF_receptor | 37..372 | CDD:279440 | 56/358 (16%) | ||
PBP2_iGluR_AMPA_GluR1 | 406..787 | CDD:270447 | 61/423 (14%) | ||
Glutamate binding. /evidence=ECO:0000250 | 492..494 | 0/1 (0%) | |||
Lig_chan | 538..817 | CDD:278489 | 44/312 (14%) |