Sequence 1: | NP_001106796.1 | Gene: | Gria1 / 14799 | MGIID: | 95808 | Length: | 907 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_649720.2 | Gene: | Ir84a / 40891 | FlyBaseID: | FBgn0037501 | Length: | 644 | Species: | Drosophila melanogaster |
Alignment Length: | 621 | Identity: | 137/621 - (22%) |
---|---|---|---|
Similarity: | 243/621 - (39%) | Gaps: | 142/621 - (22%) |
- Green bases have known domain annotations that are detailed below.
Mouse 280 RVDWKRPK----------YTSALTYDGVKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPW--- 331
Mouse 332 GQG---IDIQRALQQV----RFEGLTGNVQFNEKG---------------RRTNYTLHVIEMKHD 374
Mouse 375 GIRKIGYWNEDDKFVPAATDAQAGGD--NSSVQNR------TYIVTTIL-EDP-------YVMLK 423
Mouse 424 KNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNGMVGELVYGRADV 488
Mouse 489 AVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVV 553
Mouse 554 LFLVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFS-LGAFMQQGCDISP-----RSLSG 612
Mouse 613 RIVGGVWWFFTLIIISSYTANLAAFLTVE--RMVSPIESAEDLAKQTEIAYGTLEAGSTKEFFRR 675
Mouse 676 SKIAVFEKMWT--YMKSAEPSVFVRTTEEGMIRVRKSKGKYAY----------LLESTMNEYIEQ 728
Mouse 729 RKPCDTMKVGGNL--DSKGYGIATPKGSALRGPVNLAVLKLSEQGVLDKLKSKWWYDKGECGSKD 791
Mouse 792 SGSKDKTSALSLSNVAGVFYILIGGLGLAMLVALIE 827 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Gria1 | NP_001106796.1 | PBP1_iGluR_AMPA_GluR1 | 26..389 | CDD:107385 | 30/143 (21%) |
ANF_receptor | 37..372 | CDD:279440 | 27/126 (21%) | ||
PBP2_iGluR_AMPA_GluR1 | 406..787 | CDD:270447 | 93/416 (22%) | ||
Glutamate binding. /evidence=ECO:0000250 | 492..494 | 1/1 (100%) | |||
Lig_chan | 538..817 | CDD:278489 | 65/300 (22%) |