Sequence 1: | NP_001106796.1 | Gene: | Gria1 / 14799 | MGIID: | 95808 | Length: | 907 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_476855.1 | Gene: | GluRIA / 38742 | FlyBaseID: | FBgn0004619 | Length: | 991 | Species: | Drosophila melanogaster |
Alignment Length: | 971 | Identity: | 380/971 - (39%) |
---|---|---|---|
Similarity: | 549/971 - (56%) | Gaps: | 131/971 - (13%) |
- Green bases have known domain annotations that are detailed below.
Mouse 25 IQIGGLFPNQQSQEHAAFRFA-----LSQLTEPPKLLPQIDIVNISDSFEMTYRFCSQFSKGVYA 84
Mouse 85 IFGFYERRTVNMLTSFCGALHVCFITPSFP----VDTSN--QFVLQLRPELQEALISIIDHYKWQ 143
Mouse 144 TFVYIYDADRGLSVLQRVLDTAAEKN--WQVTAVNILTTTEEGYRML--FQDLEKKKERLVVVDC 204
Mouse 205 ESERLNAILGQIVKLEKNG-IGYHYILANLGFMD----IDLNKFKESGA-NVTGFQLVNYTDTIP 263
Mouse 264 ARIMQQWRTSDARDHTRVDWKRPKYT-------------SALTYDGVKVMAEAFQSLRRQRID-- 313
Mouse 314 ----ISRRGNAG----------------DCLANP--AVPWGQGIDIQRALQQVRFEGLTGNVQFN 356
Mouse 357 EKGRRTNYTLHVIEMK-HDGIRKIGYWNEDDKFVPAATDAQAGGDNSSV-------QNRTYIVTT 413
Mouse 414 ILEDPYVMLKK--NANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTK-AWN 475
Mouse 476 GMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIW 540
Mouse 541 MCIVFAYIGVSVVLFLVSRFSPYEWHSEEFEEGRDQTTSDQ---------------------SNE 584
Mouse 585 FGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIES 649
Mouse 650 AEDLAKQTEIAYGTLEAGSTKEFFRRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKY 714
Mouse 715 AYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRGPVNLAVLKLSEQGVLDKLKSK 779
Mouse 780 WWYDKGECGSKDSGSKDKTSALSLSNVAGVFYILIGGLGLAMLVALIEFCYKSRSESKRMKGFCL 844
Mouse 845 IPQQSINEAIRTSTLPRNSGAGASGGSGSGENGRVVSQDFPKSMQSIPCMSHSSGMPLGAT 905 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Gria1 | NP_001106796.1 | PBP1_iGluR_AMPA_GluR1 | 26..389 | CDD:107385 | 119/421 (28%) |
ANF_receptor | 37..372 | CDD:279440 | 114/392 (29%) | ||
PBP2_iGluR_AMPA_GluR1 | 406..787 | CDD:270447 | 219/404 (54%) | ||
Glutamate binding. /evidence=ECO:0000250 | 492..494 | 0/1 (0%) | |||
Lig_chan | 538..817 | CDD:278489 | 161/299 (54%) |