Sequence 1: | NP_001106796.1 | Gene: | Gria1 / 14799 | MGIID: | 95808 | Length: | 907 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_611901.1 | Gene: | Ir60a / 37881 | FlyBaseID: | FBgn0034994 | Length: | 716 | Species: | Drosophila melanogaster |
Alignment Length: | 741 | Identity: | 117/741 - (15%) |
---|---|---|---|
Similarity: | 241/741 - (32%) | Gaps: | 229/741 - (30%) |
- Green bases have known domain annotations that are detailed below.
Mouse 201 VVDCESERLNAILGQIVKLE------KNGIG---------------------YHYILANLGFMDI 238
Mouse 239 DLNKFKESGANVTGF-QLVNYTDTIPA----RIMQQWRTSDARDHTRVDWKRPKYTSALTYDGVK 298
Mouse 299 VMAEAFQSLRRQRIDISRRGNAGD---CLANPAV----PWGQGIDIQRALQQVRFEGLTGNVQFN 356
Mouse 357 EKGRRTNYTLHV------IEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDN----SSVQNRTYIV 411
Mouse 412 TTILEDPYVM-------------LKKNANQFEGNDRYEGYC-VELAAEIAKHVGYSYRLEIVSDG 462
Mouse 463 KYGARDPDTKAWNGMVGELVYGRADVAVA---PLTITLVREEVIDF---SKPFMSLGISIMIKKP 521
Mouse 522 QKSKPGVFSFLDPLAYEIWMCIV-----FAYIGVSVVLFLVSRFSPYEWHS-------EEFEEGR 574
Mouse 575 DQTTSDQSNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLT 639
Mouse 640 VERMVSPIES---AEDLAKQTEIAYGTLEAG---STKEFFRRSKIAVFEKMWTYMKSAEPSVFVR 698
Mouse 699 TTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGN--LDSKGYGIATP--------KG 753
Mouse 754 SALRGPVNL-------------AVLKL-SEQGVLDKLKSKWWYDK---GECGSKDSGSKDKTSAL 801
Mouse 802 SLSNVAGVFYILIGGLGLAMLVALIE 827 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Gria1 | NP_001106796.1 | PBP1_iGluR_AMPA_GluR1 | 26..389 | CDD:107385 | 40/232 (17%) |
ANF_receptor | 37..372 | CDD:279440 | 37/215 (17%) | ||
PBP2_iGluR_AMPA_GluR1 | 406..787 | CDD:270447 | 65/445 (15%) | ||
Glutamate binding. /evidence=ECO:0000250 | 492..494 | 1/1 (100%) | |||
Lig_chan | 538..817 | CDD:278489 | 45/323 (14%) |