Sequence 1: | NP_001106796.1 | Gene: | Gria1 / 14799 | MGIID: | 95808 | Length: | 907 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001097043.1 | Gene: | Ir21a / 33157 | FlyBaseID: | FBgn0031209 | Length: | 842 | Species: | Drosophila melanogaster |
Alignment Length: | 862 | Identity: | 162/862 - (18%) |
---|---|---|---|
Similarity: | 294/862 - (34%) | Gaps: | 233/862 - (27%) |
- Green bases have known domain annotations that are detailed below.
Mouse 140 YKWQTFV------YIYDADRGLS----VLQRVLDTAAEKNWQVTAVNILT-TTEEGYRM------ 187
Mouse 188 LFQDLEKKKERLV-----VVDCESERLNAILGQIVKLEKNGIGYHYILANLGFMDIDLNK----- 242
Mouse 243 ----FKESGANVTGFQLVNYTDTIP-----ARIMQQWRTSDARDHTRVDWKRPKYTSALTYDGVK 298
Mouse 299 VMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNV---------Q 354
Mouse 355 FNEKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSSVQNRTYIVTTILEDPY 419
Mouse 420 VMLKKNANQF----------------------------EGNDRYEGYCVELAAEIAKHVGYSYRL 456
Mouse 457 EIVSDGKYGARDPDTKAWNGMVG----ELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGIS-- 515
Mouse 516 --IMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWHSEEFEEGRDQTT 578
Mouse 579 SDQSNEFG-IFNSLWFSLG------AFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAA 636
Mouse 637 FLTVERMVSPIESAEDLAKQTEIAYGTLEAGSTKEFFRRSKIAVFEKMWTYMKSAEPSVFVRTTE 701
Mouse 702 EGMIRVRKS-KGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKG-------------YGIATPK 752
Mouse 753 GSALRGPVNLAVLKLSEQGVLDKLKSK--WWYDKGECGSKDSGSKDKT--------SALSLSNVA 807
Mouse 808 GVFYILIGG--LGLAMLVALIEFCYKSRSESKRMKGFCLIPQQSINEAIRTSTLPRNSGAGASGG 870
Mouse 871 SGSGENGRVVSQDFPKS 887 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Gria1 | NP_001106796.1 | PBP1_iGluR_AMPA_GluR1 | 26..389 | CDD:107385 | 50/293 (17%) |
ANF_receptor | 37..372 | CDD:279440 | 48/276 (17%) | ||
PBP2_iGluR_AMPA_GluR1 | 406..787 | CDD:270447 | 86/439 (20%) | ||
Glutamate binding. /evidence=ECO:0000250 | 492..494 | 0/1 (0%) | |||
Lig_chan | 538..817 | CDD:278489 | 63/311 (20%) |